Gene Information

Name : C427_2733 (C427_2733)
Accession : YP_007544190.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2581063 - 2581788 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAGTTACTCAAATGTACCAATCTGTCCAAAGAATATAACGATGGAGAAAACAGGGTTAAGGTGCTTAAAAACAT
CAATTTTTCTATTAATAAAGCCGAGCAAGTTGCCATTGTAGGCAGTTCAGGCTCGGGTAAAAGTACCTTATTACACTTGC
TAGGGGCTCTAGATAAACCTACCTCAGGGCAAGTGACGTTTGAACAACAAGACATATTTACTTTTAGCAGCAATCAACAA
GCTCAATTTCGTAATCAATCCCTTGGTTTTGTTTATCAGTTCCATCATTTATTACCCGAGTTTAGTGCGTTAGAAAACGT
CGCTATGCCTCTATTAATAGCTAAAAAAGCTATTAAACAAGCAAATGAGTCAGCCATGGCTATGTTGGATAAGGTCGGGT
TATCTCACCGATACAAACATAAACCTGCTGAATTATCGGGTGGTGAACGGCAACGTGTGGCTATTGCCAGAGCTTTGGTG
ACCCAACCCAAATTAATACTTGCAGACGAACCGACAGGCAACCTAGATCAAAAAACCGGTGAAAGTATTTACCAGTTACT
CAGTGACTTACGCGAGCAAATGCATACCAGCTTTGTGGTGGTGACCCATGATACTCAATTGGCTAAAAGATTAGACCGCT
CTTTACACTTAATCGACGGCTGCTTGAGTGATGCATCCACTGAAACAATAGACATTTTAACAAACGATATAAAGGGCACT
ATCTAG

Protein sequence : 
MSELLKCTNLSKEYNDGENRVKVLKNINFSINKAEQVAIVGSSGSGKSTLLHLLGALDKPTSGQVTFEQQDIFTFSSNQQ
AQFRNQSLGFVYQFHHLLPEFSALENVAMPLLIAKKAIKQANESAMAMLDKVGLSHRYKHKPAELSGGERQRVAIARALV
TQPKLILADEPTGNLDQKTGESIYQLLSDLREQMHTSFVVVTHDTQLAKRLDRSLHLIDGCLSDASTETIDILTNDIKGT
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_2733 YP_007544190.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-39 47
C427_2733 YP_007544190.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 9e-37 45
C427_2733 YP_007544190.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 1e-39 44