Gene Information

Name : C427_2565 (C427_2565)
Accession : YP_007544022.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2415710 - 2416408 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
TTGGAACAGACTCAGTACACATTTTTATCGTTAAAAATTAAAGAGACCCTTACCTTGATTAAACTGCTGTTAGTAGATGA
CCATGAATTAGTCAGAACCGGAATCCGTCGTATTTTAGAAGATGTATCCGATTTTGAAGTAGTAGGTGAAGCCACTAATG
GTGAAGATGCGGTAAAATTTTGTCGGAATCATGCACCAGATTTGGTGTTGATGGACATGAGTATGCCGGGAATTGGCGGC
TTAGAAGCGACAAAACAAATTTTACGTTTTTCTGAGAATACCCGCGTTATAGTGTTATCTGTTCACAAAGAAAACCCTAT
CCCCGCCAGAGTCATGCAAATGGGAGCGTTTGGTTACCTAACCAAAGACTCTGATCCTGAGGAGATGATAAAAGCGATTT
ATAAAGTGGCCGCAGGCCAAAAGTATGTTTCGCCCGACATAGCTCAGCAAATTGCACTTGGGCAACTTAATTTGAGCGGC
AGCAATCCTTTTGATCAATTATCTGAACGAGAGCTCGAAATAACCTTAATGCTGACTAAAGGTGCCAAAGTGCCTGATAT
AGCGGCGTATTTAAATATCAGTGCCAAAACAGTTAACACTTATCGTTACAGAATGTTTGGTAAGCTCAATGTGAGTACTG
ATGTTGAGCTTACCCACCTCGCATTGCGCCATAAATTAATACAGACGGATCAAATGTAA

Protein sequence :
MEQTQYTFLSLKIKETLTLIKLLLVDDHELVRTGIRRILEDVSDFEVVGEATNGEDAVKFCRNHAPDLVLMDMSMPGIGG
LEATKQILRFSENTRVIVLSVHKENPIPARVMQMGAFGYLTKDSDPEEMIKAIYKVAAGQKYVSPDIAQQIALGQLNLSG
SNPFDQLSERELEITLMLTKGAKVPDIAAYLNISAKTVNTYRYRMFGKLNVSTDVELTHLALRHKLIQTDQM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 6e-45 50
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 6e-45 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_2565 YP_007544022.1 two component LuxR family transcriptional regulator VFG1889 Protein 7e-53 53