Gene Information

Name : lspA (C427_1677)
Accession : YP_007543134.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1575242 - 1575736 bp
Length : 495 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTAAACTTTTTACCGAAACGGGGTGGCGTTTTTTATGGTTGTCTGTGTTGGTATTAGTGGCAGATCAATATACTAA
AGCTTTAGTGTTAGATAATATTGAACTCTATCAAGCTATTCAAATATTGCCATTTTTTAATTTCACTCACGTATATAACT
ACGGCGCTGCTTTTAGTTTTTTACATGATGCTGGTGGCTGGCAGCGCTGGTTTTTCACTATTATTGCTTTTGCTGTTAGT
GCTTTGGTGTTGTGGTGGTCAAAACAAACAACGAAACAACAAATAATGCTACCCATCGCTTTTAGTCTGATTATTGGCGG
GGCCATAGGCAATGCTTATGATCGATTAGTTCATGGTTACGTAATAGATTTTTTAGTGTTGTATTATCAAGATTGGTATT
GGCCAGCGTTTAACGTAGCCGACAGTGCAATATGTATAGGTGCCGTTTTGTTGATCATTGATATGTTTAAGAATAAAGAG
GAAAAAAATGACTGA

Protein sequence : 
MLKLFTETGWRFLWLSVLVLVADQYTKALVLDNIELYQAIQILPFFNFTHVYNYGAAFSFLHDAGGWQRWFFTIIAFAVS
ALVLWWSKQTTKQQIMLPIAFSLIIGGAIGNAYDRLVHGYVIDFLVLYYQDWYWPAFNVADSAICIGAVLLIIDMFKNKE
EKND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-23 43
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-16 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 2e-17 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 2e-17 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 2e-17 42
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 9e-16 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 2e-17 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-17 42
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 6e-16 42