Gene Information

Name : C427_1345 (C427_1345)
Accession : YP_007542802.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Virulence
Product : type I glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1260850 - 1262259 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGCACAAAAGGCCTTAGACCTTATTAAAGAAACCGAAGCTAAATTTGTTGATTTACGCTTTACTGATACAAAAGG
CAAGGAACAACATGTTTCTATCCCTACTCATCAAGTGACTGAAGACTTCTTCGAAGAAGGCAAAATGTTTGACGGTTCTT
CTATCCTAGGTTGGAAGGGTATTAACGAATCAGACATGATCTTGATGCCTGATGGCGAAACGGCTGTACTTGACCCATTT
GCTGAAGAAACTCAAATTAATATTCGTTGTGATATTTTAGAACCAATGACCATGCAGGGCTATGACCGTGATCCTCGTTC
TATTGCTCGTCGCGCAGAAGAATATTTGAAGTCAACAGGTATTGGCGACAAAGTGTTAGTCGGACCTGAGCCAGAATTTT
TCTTGTTTGACGATGTTCGTTTCCATACCGATATGGCTGGTTCTTTCTTCAAAATTGATTCTAGTGAAGCCAAGTGGAAT
TCAGGCTCTGAGTTTGAAGAAGGTAATATGGCCCACCGTCCTGGTGTTAAAGGTGGTTATTTCCCAGTTCCTCCAGTCGA
TTCGGCTCACGATACACGCGCAGCTATGTGTATGGTTATGGAAGAAATGGGCTTAACTGTTGAAGCGCATCACCATGAAG
TAGCGACCGCCGGTCAAAACGAAATTGCATGCCTTTTCAATACATTGGTTAAAAAAGCTGATGAAGTTCAAATCTATAAG
TATGTTGTACATAATGTTGCTCATGCTTACGGACAAACAGCTACCTTTATGCCAAAGCCTATTGTGGGTGATAATGGTTC
TGGTATGCATGTTCACATATCAATTTCTAAGGAAGGCAAAAATGTCTTTGCTGGAGACAAATATGCTGGCATGTCTGAAG
AAGCTTTATTCTATATTGGCGGTATCATTAAACATGCTCGCGCAATTAACGCTTTCACTAACGCATCGACGAACTCCTAC
AAACGTTTAGTACCTGGTTTCGAAGCACCTGTTATGTTGGCATATTCTGCACGTAACCGTTCTGCTTCTATTCGTATTCC
TTTTGTGACTAGCGAGAGAGCTCGTCGAATCGAAGTACGTTTCCCAGACCCAACAGGTAACCCTTATCTAGCTTTCACTG
CATTGTTGATGGCCGGTCTTGACGGGATCAAAAACAAGATTCATCCTGGTGATTCAATGGACAAAGATTTGTATGACTTG
CCCCCTGAAGAAGCTGCGGCAATCCCACAAGTATGTAGTTCACTTGAGCAAGCGTTGGAAGCCCTTAATAACGACCGTGA
GTTCTTAACTGTCGGTGGTGTTATGACTGACGACTCGATTGATGCTTACATAGCACTTAAGAGTGAAGAAGTGCAATTAC
TAAACATGTCAACTCATCCAGTTGAGTTTGATATGTATTACAGCGTTTAA

Protein sequence :
MSAQKALDLIKETEAKFVDLRFTDTKGKEQHVSIPTHQVTEDFFEEGKMFDGSSILGWKGINESDMILMPDGETAVLDPF
AEETQINIRCDILEPMTMQGYDRDPRSIARRAEEYLKSTGIGDKVLVGPEPEFFLFDDVRFHTDMAGSFFKIDSSEAKWN
SGSEFEEGNMAHRPGVKGGYFPVPPVDSAHDTRAAMCMVMEEMGLTVEAHHHEVATAGQNEIACLFNTLVKKADEVQIYK
YVVHNVAHAYGQTATFMPKPIVGDNGSGMHVHISISKEGKNVFAGDKYAGMSEEALFYIGGIIKHARAINAFTNASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPFVTSERARRIEVRFPDPTGNPYLAFTALLMAGLDGIKNKIHPGDSMDKDLYDL
PPEEAAAIPQVCSSLEQALEALNNDREFLTVGGVMTDDSIDAYIALKSEEVQLLNMSTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-103 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_1345 YP_007542802.1 type I glutamine synthetase VFG1399 Protein 3e-109 49