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Name : C427_1175 (C427_1175) Accession : YP_007542632.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1097087 - 1099018 bp Length : 1932 bp Strand : + Note : - DNA sequence : ATGCGCCTTTTTATTGCCGAAAAACCCAGTTTAGGTCGTGCCATTGCCGATGTATTACCCAAGCCTCATAAAAAAGGTGA TGGGTACATTACTGCGGCTAATGGCGACACAGTGAGTTGGTGTATTGGGCATTTACTCGAACAACAACAACCAGAGGCTT ACGACCCAGCTTTTAAAAAGTGGAACCATGAACATCTGCCTATTATTCCCCAGCAGTGGCAGCTTGCAGTGAAAAAGAAT ACAGCCAAACAACTGGGAGTGTTACGCACCTTGGTTAAGCAAGCTGAGCAACTCATTCACGCTGGCGATCCTGATAGGGA AGGTCAGTTGCTGGTTGACGAAGTGATTAATTTCTTAGGGGTAACTGGCGCCAAAAAAGACAGTATTCAGCGCTGTTTAA TTAATGATTTAAATCCCTCTGCAGTAAAGCAATCCCTAAGTAAATTGCGTAGTAATCGAGAATTTATCCCCTTGTCTACT TCTGCTCTGGCTCGCTCTCGAGCTGACTGGTTATACGGTATAAATCTGACTCGTGCCTACACCCTTCAAGGTCAAAAAGT GGGGTATAAAGGCGTGTTATCGGTGGGCCGAGTACAAACACCTCTGTTGGGTTTAGTGGTGCGACGCGATAACGCAATAG AAGCCTTTGTTAGCAAAGCATTCTATGAAGTATGGGCATGCTTAGAAACAGAAAAAGGGGAGCATTTTAAAGCTAAGTGG CAACCTAGTGAGCAGTGTGCCAAGTACCTTGATGAGCAAGGCCGAAATTTATCCCAAGCGTTAGCACAGAACGTTGCCGG GCGCATAAGCCAGCAACCGGCACAAGTAAAAAAACTGAAACGTGAGCATAAAAAACCAGCACCGCCACTGCCTTATAATT TGTCATCTTTACAAATAGATGCCAGTAAAGCCTTTGGTTTGAGTGCCCAACAGGTGTTGGATATTTGCCAGGGTTTATAT GAACGCCACAAACTCATTACGTATCCTCGCTCAGATTGTCGTTATTTACCTCTTAGTCATTTTGTTGAGGCGAAAGATGT GCACGCTGCCATTTTGAGCAATAGCCAACATTTGGGTCAACAAGGTAGTCTATTTAGTCAAACCCAGTTTGATTTAAAGC GCAAATCAAAAGCTTGGAATGATAAAAAAGTAGATGCTCACCATGCCATTATTCCCACTAAAAAAACCAGCAATCATCTT TCTGGTAACGATGCCAAGGTGTATGCATTAATCTGCCGAAATTATCTAGCGCAATTTTTAGGTGAGCACCAGTATCATGC CGTACGCGTTGAAGTAGAGATTGCTTTGGGTTTATTTGTCGCAGTGGCTAAAGAGCTGATAGAAGACGGTTGGCGGTCTA TCTTTATCCAGCGCAGTAAAAGCCATAACCAAGATAACAACAACGAAACAGAGCAGCTATTACCCCGTTTAAATCTTGGG CAACACCTTAAATCATTACAGGCAGAAGTATTAGAAAAGCATACCTCACCACCTAAAGCCTATACCGATGCAAGTTTATT AGCCGCCATGACAGGAATTAGTGCTCATGTTAGCGATCCCCAACTCCGAAAAATACTGCGCGATACCGACGGCTTAGGCA CCGAGGCAACCAGAGCAGGTATTATAGAACTATTATTTTCACGAGGTTTTTTGTCGCGTACGGGGAAAACCATTACCTCA ACTTCGAGTGGCAGGGGGTTGATCGAAGCTTTGCCCGATGTGGCCACGTATCCGGATATGACTGCCCGTTGGGAGTCTGA GCTATCTGCTATAAGCGAAGGAAGAAGTCAATATAAAAAATTAATGAGCCCGCTGCAGGAGCAACTTAAAGAACTTGTGG TACAAAGCCGTGAAGTGTTGCCAAAAGGTTTGTCGGGTTTAGGTAAACCGCGTTTTGCAAAGAAACGTAGAGCTAGTACT AAGCGTAAATAG Protein sequence : MRLFIAEKPSLGRAIADVLPKPHKKGDGYITAANGDTVSWCIGHLLEQQQPEAYDPAFKKWNHEHLPIIPQQWQLAVKKN TAKQLGVLRTLVKQAEQLIHAGDPDREGQLLVDEVINFLGVTGAKKDSIQRCLINDLNPSAVKQSLSKLRSNREFIPLST SALARSRADWLYGINLTRAYTLQGQKVGYKGVLSVGRVQTPLLGLVVRRDNAIEAFVSKAFYEVWACLETEKGEHFKAKW QPSEQCAKYLDEQGRNLSQALAQNVAGRISQQPAQVKKLKREHKKPAPPLPYNLSSLQIDASKAFGLSAQQVLDICQGLY ERHKLITYPRSDCRYLPLSHFVEAKDVHAAILSNSQHLGQQGSLFSQTQFDLKRKSKAWNDKKVDAHHAIIPTKKTSNHL SGNDAKVYALICRNYLAQFLGEHQYHAVRVEVEIALGLFVAVAKELIEDGWRSIFIQRSKSHNQDNNNETEQLLPRLNLG QHLKSLQAEVLEKHTSPPKAYTDASLLAAMTGISAHVSDPQLRKILRDTDGLGTEATRAGIIELLFSRGFLSRTGKTITS TSSGRGLIEALPDVATYPDMTARWESELSAISEGRSQYKKLMSPLQEQLKELVVQSREVLPKGLSGLGKPRFAKKRRAST KRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 9e-104 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-108 | 41 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-108 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 9e-108 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-103 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-110 | 41 |
