Gene Information

Name : cagL (HPOK310_0793)
Accession : YP_007538427.1
Strain : Helicobacter pylori OK310
Genome accession: NC_020509
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 832641 - 833354 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACACTTGTGAAAAATACCATATCTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACGAGCGGTTT
AAAGCAACTTGATAGCACCTACAAAGAGACCAACCAGCAAGTGCTCAAAAACTTAGGTGAGATTTTTTCAACCACTAGCC
CTAGCACTAATTATGAAATAGGTAAAGAAGATGCTCTAAACATCAAAAAAGCGGCCATTGCTTTGAGAGGAGATTTAGCG
TTATTGAAAGCCAATTTTGAAGCGAATAAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAGACTTATATGTCTAGCCC
TGAACTTTTATTAACCTATATGAAAATCAATCCCTTAGATCAAAAGACTGCTGAGCAGCAATGCGGAATATCCGATAAAG
TTTTAGTTCTTTATTGTGAGGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCTCTA
AAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCCTTAATCACTGCTTCACAGACGCTTGTAGAAAGCCTAAAGAATAA
AAATTTCATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTTAAATTATTTAGAAAAGTTGGACGCAT
TAGAAATATCCCTAGAACAAAATAAGCGGCAATACCTACAAGAAAGGCAATCAAGTAAGATTATTGTTAAATGA

Protein sequence : 
MKTLVKNTISSFLLLSVLMAEDITSGLKQLDSTYKETNQQVLKNLGEIFSTTSPSTNYEIGKEDALNIKKAAIALRGDLA
LLKANFEANKLFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSL
KAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEKLDALEISLEQNKRQYLQERQSSKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0539 BAD14010.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
cagL YP_005774532.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
cagL YP_005777280.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
HP0539 BAD13818.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
cagL YP_005779054.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-101 97
HP0539 BAD13791.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-101 97
HP0539 BAD13845.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-100 97
HP0539 BAD13955.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
HP0539 BAD14064.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 96
HP0539 BAD13872.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 96
HP0539 BAD14037.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 96
HP0539 BAD13982.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-100 96
cagL AGC69801.1 cag pathogenicity island protein L Virulence cag PAI Protein 3e-100 96
HP0539 NP_207335.1 cag pathogenicity island protein (cag18) Virulence cag PAI Protein 2e-99 96
HP0539 BAD13900.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-101 96
cagL YP_003728725.1 cag pathogenicity island protein L Virulence cag PAI Protein 5e-100 96
cagL AAC44697.1 CagL Virulence cag PAI Protein 1e-99 96
cagL YP_005775739.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 96
cag18 AAR03873.1 Cag18 Virulence cag PAI Protein 1e-99 95
HP0539 BAD13927.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-97 95
cag18 AAR03962.1 Cag18 Virulence cag PAI Protein 3e-98 95
cagL NP_223205.1 cag island protein Virulence cag PAI Protein 4e-98 95
cag18 AAR03931.1 Cag18 Virulence cag PAI Protein 1e-98 95
cag18 AAR03901.1 Cag18 Virulence cag PAI Protein 7e-99 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagL YP_007538427.1 cag pathogenicity island protein VFG0298 Protein 6e-100 96