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Name : tktA (HPOK310_0364) Accession : YP_007537998.1 Strain : Helicobacter pylori OK310 Genome accession: NC_020509 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 375415 - 377340 bp Length : 1926 bp Strand : - Note : - DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAACACGCTGCGCTTTTTGTGTGCGGACATGATAGA TAGGGCTAATAGTGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTGCACTTAAACCTAA ACCCCACTAACCCTAAATGGCTCAATAGAGATAGGCTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGTTTTGATTTGAGCCTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATCACGACTGGGCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAAACCTTTTAGACAAAGAAGCCATTTCTCATAAAGTCTATTGTTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTAGCAGGGCACCTCAACCTGAACAACCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATCAATATTAGTTTTAGCGAACAGGTCAAGATGCGGTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCACCAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCACCCCTAAA TAAAGAAGTGTTAAGACAATCCAAAGAAAACGCTCAAATCAATCCTAATGAAAGCTTTATCATTAGCCCAAAAAGCAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAAGCTTTATGGGAAAAATCCTTAAGCCCTAAAGCAAAAGAA AAGATCCATGCGTTGAAGGATTTTGATTTTAGCGCCATCAATTACCCCGTTTTCAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGCTTTTTAGGGGGGAGCGCGGATTTAGCCCCAT CCAATAATACGCAATTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTACTT GATGCCTAGCATTCGTTTGAGTGCTTTAATGAAACTAAAAGCCCTTTTTATTTTTACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCCACGCACCAACCCATAGAGCAATTGAGCCATTTGCGTGCTTTGCCCAATTTCTACGCTTTCAGACCTAGC GATGCTTTTGAAAATACCGCTTGCATGCAAATAGCGTTAAGTTTGAGCGCTCCTAGCGGGCTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTTTCTAAAGAGCAGGTTTTAAAAGGCGCGTATGTTAAATATGATGCTAAAAATCCCGTTA TCACGCTCGTTGCGAGCGGGAGCGAAGTTTCCTTGGCTTTAGAGAGTGCTAAAATGTTAGAACGAGAAAATATCCCCACT CAAGTGGTGAGCGTGCCATGCTTTGATTTATTGGTGGAACAAGATGAAAGCTATCTTAAAGAGCTTTTTAAGGGTAAAGT TTTAGTGATTGAAGCGAGTCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCACTCAAGCTAAAAGGTTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDRANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEAKKSTKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLRQSKENAQINPNESFIISPKSKMHFEEVKVRGVSLEALWEKSLSPKAKE KIHALKDFDFSAINYPVFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQIALSLSAPSGLILSRQNLPVLDEVSKEQVLKGAYVKYDAKNPVITLVASGSEVSLALESAKMLERENIPT QVVSVPCFDLLVEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITTQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-97 | 41 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-86 | 41 |
