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Name : serS (HPOK310_1329) Accession : YP_007538963.1 Strain : Helicobacter pylori OK310 Genome accession: NC_020509 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1420647 - 1421894 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAACAATGCGATGGATGA TGAATTGGAGCGTTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAGGCTTGCAAGCCTTTCAAA ACAGGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCCAAAAGCGTGGGCGAATTGGAACAACAAATAGATTTAAAGCTTTCAATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCACAAGCGAAGAAGACAATATAGAGATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCCAAAGAGCATTTTGAGCTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCTGTCATTAGGGGTTTTGGGGCTAAAATTTATCGTGCGCTCATTCATTTAATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTGCCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCTACCGCTGAAGTAACGCTCACTAATCTATAC AACGATACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCACACACGCCTTGTTTTAGGAGCGAAGCGGGGAG TGCGGGCAAGGACACAAGGGGGATGATAAGACAACACCAGTTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTTATGCAAGAGCATATGCTAGAGAGCGCGAGCGAAATTTTAAAGGCTTTGGAATTACCGCACCGGTTTGTG CAATTGTGCAGCACGGATTTAGGTTTTAGTGCAAGCAACACGATAGATATTGAAGTGTGGCTGCCCGGGCAAAATTGCTA CAGAGAAATCAGCTCCGTGTCTAACACGAGGGATTTTCAAGCCAGGCGCGCGAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATTCATATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNRVSKEFGIKMAQKVDTSDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTSEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEHMLESASEILKALELPHRFV QLCSTDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-76 | 45 |
