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Name : katA (HPOK113_0884) Accession : YP_007536998.1 Strain : Helicobacter pylori OK113 Genome accession: NC_020508 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 932999 - 934516 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGGATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACAGAATGCTTTTTCAGATTTTCTACTGTGGCTGGTGAAAGAGGTGCTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACCCAAAAACGAGACCCTCAAACCAATTTGCCTAACCCC GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGTTTGTATCAAGTAACATGGGTTATGAGCGATAGGGGCATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGCCTTATCAATGCAAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTTTAACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCCGCAGAAATCAGAAAACATGATCCTGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTGAGCATTCAAGTGATGCCCGA AGAAGATGCTAAAAAGTATCGATTCCATCCGTTTGATGTGACTAAAATTTGGTATCTCAAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAGAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTGCAAGGGCGCTTGTTCTCTTATGGGGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTTAATAGACCAAGGTGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATATTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAGGATAAGAGCGCGAGAGATCCT AAGTTCAACTTAGCTCACATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACTCATAAAGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGATCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCATCACATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGAADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFLTMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLKDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-135 | 61 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 8e-93 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
