Gene Information

Name : cagI (HPOK113_0558)
Accession : YP_007536672.1
Strain : Helicobacter pylori OK113
Genome accession: NC_020508
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 589298 - 590443 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence : 
GTGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTGTGGCTTGTTTCTGAATGGTGCAGGGGCAGTAATAACGCT
TGAATCTGCCTTAAAAGCCATTCAGGCGGATGCGCAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGTCATAGAGG
CTCAATCTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGACAATTGAGAACTCAGCTTGCAACTATAAGTGCT
ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATAGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT
TGGCGTCATGGAAGGGTATTCAAGCACGCTTAGCGCATTGGGAGGAAATGTCAACATGATCGTGGAAAAACAAAAAATTA
ATACCCAAACAGAAATCCAAAACATGCAAATTGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAA
AACGCTCTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGC
TCTAGGAAGTTCTTCTGACAACGCTAAATACATCGCTTACAATACAATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAG
GTTTTGAAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGACTACAATTCCCTAACAGGTCAGGCTTTGTTT
CAAAGCACCATCTACGAGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCATTGAAACATTTACTCT
AGCACCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA
AGATTGTAGCCCTTATTCAAAATAAACTAAATGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAA
ATCAAAACCTTAAAAGGATCAGTAGATTTGAATGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA
TATAGAGAATCTTGAAAAAAAAGCCGATCTTTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTG
CTAGCTCTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFCGLFLNGAGAVITLESALKAIQADAQAKQKTAQAELKVIEAQSNAKEKAIQAQIEGQLRTQLATISA
MLKGANGVINGVNSMTGGFFAGSDILLGVMEGYSSTLSALGGNVNMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQ
NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALF
QSTIYEPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNDADFQNIAYLNGINEE
IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-154 99
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-160 99
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-160 99
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-160 99
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-160 99
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-161 99
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-161 99
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-158 98
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-159 98
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-159 98
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-156 97
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 9e-157 97
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-155 96
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 1e-155 96
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-156 96
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 3e-155 96
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 2e-155 96
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-156 96
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 6e-156 96
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-152 96
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-155 95
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 6e-155 95
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 5e-155 95
cagI AAF80208.1 CagI Virulence cag PAI Protein 4e-155 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagI YP_007536672.1 cag pathogenicity island protein VFG0299 Protein 5e-156 96