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Name : virD4-1 (HPOK113_0527) Accession : YP_007536641.1 Strain : Helicobacter pylori OK113 Genome accession: NC_020508 Putative virulence/resistance : Virulence Product : conjugal transfer protein Function : - COG functional category : - COG ID : - EC number : - Position : 543586 - 545181 bp Length : 1596 bp Strand : + Note : - DNA sequence : ATGAACTTTGACCAACGCCTAAGGCTTGTTCAAGAAAATGCTAATAATGTCTTTATTAGCGAAGAAAAAGGCGAAGACCA TTGGGTATCTAAAGCTAAAGATTTATTTAGTTTTTACGCCTTGTATGATGTTTGTTCCAAAGATGAAACAAACTTTTTTG ATGTCGCTATGGGTCCAAATAGAGATTATGTTAATTTGATTGACAAAAGAAGCCGTTATTACAAACAACTCTATCAACAC GATAAAAAAACAGGCGAAATTATCCTAGACCCACAAACTAATGAGCCTATTTTAATCCCTAATGTGAATGCGAGAAAATT GTGGTATTTGCAAGTTTCAGAGCAAAAATACGCCGACCCCAAAGACCCTAGAAATTTTGACCCAAATGAACCTGAACCAA CTCCTAGAAGTGAAGAGGCATTAGATGAAATTGTAAGAAATGATGCAAGAGCTTGGGCTAATAGTGCTGAAGAAGAATTT GCAAGTATCATTTCTACCTTTAATCGCTTTGTGTCTGTTTTTAAGAGCAATCAAGTAAGAATTGCTACTTCTAAAATGAG CTTTGATTATGAAGAATTAAGAACGGACAATATTAGTCTTTATATTGTTATTGCTCAAAAAGATATTAACACGCTTGCTC CCTTAGTTAGAGTGATTTTAGAAAGCATTGCTAAAAACTTATTAACTAATGAAAGCTCTAAAAAAGAAGAACGCATTTAT ATGATTTTAGATGAATTTGTTAGATTTGGTAAGTTGCCCTTCTTATTAGAAATGCCAGCATTGTGTCGTTCTTATAATGT TGTCCCCTTATTCATCACACAAGATTATGCGATGATTAGAAAATATTATAGCGATGATGATTTGAAAATCTTAAAAGGCG TGGTGCATTATAACATTGTCTTTAAGATGAATAGCGCTGAAGATGCTGAGATTGTCTCTAAGGAAGTGGGCGAATTTACT AGACAATCTAAAAACTATTCTACTGAAAAAAATCAATTAGTCTTTGGAGGTAGTTCTTCTTATAGCCATGAGGGTAGAAA CTTACTCACAGCCCAAGACATTATGAATATAGAATCAGATGAAGTCATCGTAATTGTTACAGGGGCTAAAGCGACCCCTT TAAAACTCAAAGCTAATTATTGGTTCAAAGATAAAGAGCTTTTAAAAAGAGCTAATTTGCCCATTGATTTAGAAGTAGAA AGAAAAAGAGTTGAAGAACCTACGCAACCCACTACAGAAATTACAACGCCCCCTAATCAAAACAAACAAGATACAGCTAA CTTAGAACCAAGCAATAATGGAGGATATACAGAAAATGAAAGTAGTGAAAGCAACAACGAGAATAATCCCACTACACCAC AAAAAGAGAGTGAAAATTCAAACCCAACAGAAAGCGAGAAAGACCATGAAAACCCCACTACTTCACAAGAAAAAAGCAAA AATGAAAACACGGAGCAAGAAAATGATGAGACTGATGAGATTTTAAAAAAGCCACTCAATGAAATGAACACAGAAGGAAA AAGAGCCTTGTTTAAGAAAATGCAACAAGGCGATGAAGAAAGCGAACAAGAAGTTCTACAAGACACCCAAAGTTAA Protein sequence : MNFDQRLRLVQENANNVFISEEKGEDHWVSKAKDLFSFYALYDVCSKDETNFFDVAMGPNRDYVNLIDKRSRYYKQLYQH DKKTGEIILDPQTNEPILIPNVNARKLWYLQVSEQKYADPKDPRNFDPNEPEPTPRSEEALDEIVRNDARAWANSAEEEF ASIISTFNRFVSVFKSNQVRIATSKMSFDYEELRTDNISLYIVIAQKDINTLAPLVRVILESIAKNLLTNESSKKEERIY MILDEFVRFGKLPFLLEMPALCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFT RQSKNYSTEKNQLVFGGSSSYSHEGRNLLTAQDIMNIESDEVIVIVTGAKATPLKLKANYWFKDKELLKRANLPIDLEVE RKRVEEPTQPTTEITTPPNQNKQDTANLEPSNNGGYTENESSESNNENNPTTPQKESENSNPTESEKDHENPTTSQEKSK NENTEQENDETDEILKKPLNEMNTEGKRALFKKMQQGDEESEQEVLQDTQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD4-1 | YP_002301090.1 | VirD4 coupling protein | Virulence | cag PAI | Protein | 2e-102 | 53 |
