Gene Information

Name : HPOK113_0524 (HPOK113_0524)
Accession : YP_007536638.1
Strain : Helicobacter pylori OK113
Genome accession: NC_020508
Putative virulence/resistance : Virulence
Product : type IV secretion system ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 541461 - 542405 bp
Length : 945 bp
Strand : +
Note : -

DNA sequence : 
ATGGACTTAGACAAACTCAAAGATTATAGGGCTTTAAGAAACGCTATTTTAAGGCTCTTGCCTTATTTAGATATCGGTAT
TACAGAGCTGATTATGAATAAAGAAAAAGAAATTTGGCTCTATAAGCTTGATGGAGTAAGAGAAAAAGTCTTTGATGAAA
ATTTAGACAAAGCTTTTCTACTTGGTTTTGGGGAGCAATTAGCGAGTTTTAGAGATTTATTCTTTAACGCTAATTACCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATATAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCAGGTGAGAAAAAGTTTGATTTAAAAGCTTTCAAGCTCTCTAGTGTGTGTCAATACGACTATG
AGTATTTACAAAACTTAATGATTGAGGGAAAGAACTTGCTTATTAGTGGAGGCACAGGCAGTGGAAAAACAAGCTTTTTA
AACGCTTTGATTGAATTTATCCCTAAACACACACGAATAGTGAGTGTAGAAGATAGCGAAGAATTAGATTTAAGAGCGTT
TGAAAATCATAAATCCTTGTTAGTGGATAAGACCGAAAGCTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGAGTCCTGATAGGCTTATGGTAGGTGAGATTGACACACGAAATGCTATGCTTTTTTTAAGATTTGGCAATACAGGG
CATAAGGGCATGGTTTCTACTTTACATGCAGATAGCGTGCATGGGGTCATAGAGGCGATTGCTTTAAATCTACAGATGAA
TAAAAGTGGTTTAGATGTAAAAGTAGCTAGAAAATTCTTTGAAAGCAGTGTGGATATAGTCGTTCAAATTGTGCTTGATA
AAGCCACTAACACTAGATATATCCAAGAAATCTTACCCACCAAAGAATTAAGAAGTAGCCTATGA

Protein sequence : 
MDLDKLKDYRALRNAILRLLPYLDIGITELIMNKEKEIWLYKLDGVREKVFDENLDKAFLLGFGEQLASFRDLFFNANYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPGEKKFDLKAFKLSSVCQYDYEYLQNLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLRAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNAMLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVKVARKFFESSVDIVVQIVLDKATNTRYIQEILPTKELRSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 2e-51 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPOK113_0524 YP_007536638.1 type IV secretion system ATPase VFG1979 Protein 3e-42 42