|
Name : metB (HPOK113_0118) Accession : YP_007536232.1 Strain : Helicobacter pylori OK113 Genome accession: NC_020508 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase/cystathionine beta-lyase Function : - COG functional category : - COG ID : - EC number : - Position : 122512 - 123654 bp Length : 1143 bp Strand : - Note : - DNA sequence : ATGCGCATGCAAACAAAATTAATCCATGGGGGCATTAGTGAGGACGCAACAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCATAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTCATCGCCGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGACTAGCTGGGATCCACGCC GTTTTTTCCCTCTTGCAATCAGGCGATCATGTGCTATTAGGCGATGATGTCTATGGGGGGACTTTTCGCTTGTTCAATAA AGTGCTTGTCAAAAACGACCTTTCTTGCACCATTATAGACACTAGCGATATATCCCAAATCAAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTAGAAACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGCGCAATGCGCTAGTGTTGCT AAAGATCATAGTTTGCTCACTATTGTGGATAATACCTTTGCCACCCCCTATTGCCAAAACCCGCTTCTTTTGGGGGCGGA TATTGTGGTGCATAGCGGCACCAAATACTTAGGCGGTCATAGCGATGTGGTCGCCGGGCTTGTAACCACTAATAATGAAG CGCTAGCCCAAGAAATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGTCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGGATTGCGCATGGAGGCCCATCAAAAAAATGCCCTTTGCGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTAGAAAAGGTTTATTACCCAGGCCTTCCCACTCACCCTAACCACGAACTAGCCAAAAAACAGATGCGTGGCTTTA GCGGGATGCTCTCTTTCACTCTCAAAAATGACAGCGAGGCGGTTGCTTTTGTAGAAAGCCTTAAACTATTCATTTTAGGC GAGAGTTTGGGCGGGGTGGAAAGCTTGGTGGGAATTCCTGCACTTATGACCCATGCGTGTATCCCCAAAGCGCAACGAGA AGCTGCCGGGATTAGAGATGGTCTGGTGCGCTTGTCTGTGGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCACTAAAATAGGCTAA Protein sequence : MRMQTKLIHGGISEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNDLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVA KDHSLLTIVDNTFATPYCQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILG ESLGGVESLVGIPALMTHACIPKAQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFTKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 4e-97 | 54 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-98 | 54 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 1e-73 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| metB | YP_007536232.1 | cystathionine gamma-synthase/cystathionine beta-lyase | BAC0207 | Protein | 2e-61 | 43 |
