Gene Information

Name : yfmD (BSU6051_07510)
Accession : YP_007532687.1
Strain : Bacillus subtilis 6051-HGW
Genome accession: NC_020507
Putative virulence/resistance : Virulence
Product : iron-dicitrate ABC transporter permease YfmD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 824711 - 825712 bp
Length : 1002 bp
Strand : -
Note : Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 12354229, 15849754, 16672620, 16850406; Product type t: transporter

DNA sequence :
TTGTATCATTCAGCCAAACGGCGCTCATCATCAAGACTGATGATGTTTATCATTGCACTGATTATTTTTATATTTGGGCT
TGGGCTGAATCTTTCAGTAGGAGCCTCAGACATCAGCATCATAGATTCATTGAAATATCTTTTTGTATGGGACGGTTCAA
AGGAACAGCTCATCATCTCTACTCTTCGCCTTCCCCGCACATTAATCGGCGTTTTTGTCGGCGCCAGCCTAGCTGTAGCA
GGGGCGCTGATGCAGGCTATGACCAGAAATCCTCTGGCTTCACCCCAAATTTTCGGTGTGAATGCGGGTGCATCGCTTTT
TGTTGTTGCTTCTCTCGTCATTCTGCCGGCATCGCCCTATTCATCTGTTATATTCGCTTTTGCGGGTGCGGCAGCAGGCG
GCGCGATTGTGTATATGATTGCCTCATCCGGCGGAATGACGCCTGTCAAGCTGGCGCTGTCAGGAATGGCCGTGCACTTG
TTCCTCTCCTCTATGACACAGGCCATCATTATTTTAAATGAGTCAGGTGAGGATGTTCTGTACTGGATGACAGGCGCAAT
CGACGGCAGCAACTGGCAGGACGTCATAACCATCGCTCCTTTTTCTGTCATTGGCATCGGGCTTGCCCTCGTATTTTCCG
GTTCTGTTTCTGTTCTCGGTCTCGGAGACGAAACAGCAAAAGGGCTTGGACAAAATATGAACGGCATCAGGATTCTGATC
AGTTTGATTATTTTAATTCTTTCCGGCGCTTCCGTAGCCGTCGCCGGGCCGATTGGCTTTGTCGGGCTGCTCGTCCCGCA
TATTGTCCGCAAGCTGATCGGAGAACATTATCAATACGTGCTTCCGTTTTCGGCACTGTTCGGTGCCATTTTGCTGGTGT
ACGCAGATGTTCTGGCCAGATGGATTGCATTTCCTTATGAATCACCGGTCGGCATTGTCACCGCGATTATCGGAACGCCG
TTTTTCTTATATTTGGCAAGGAAAGGGCGAAACCTGAAATGA

Protein sequence :
MYHSAKRRSSSRLMMFIIALIIFIFGLGLNLSVGASDISIIDSLKYLFVWDGSKEQLIISTLRLPRTLIGVFVGASLAVA
GALMQAMTRNPLASPQIFGVNAGASLFVVASLVILPASPYSSVIFAFAGAAAGGAIVYMIASSGGMTPVKLALSGMAVHL
FLSSMTQAIIILNESGEDVLYWMTGAIDGSNWQDVITIAPFSVIGIGLALVFSGSVSVLGLGDETAKGLGQNMNGIRILI
SLIILILSGASVAVAGPIGFVGLLVPHIVRKLIGEHYQYVLPFSALFGAILLVYADVLARWIAFPYESPVGIVTAIIGTP
FFLYLARKGRNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmD YP_007532687.1 iron-dicitrate ABC transporter permease YfmD VFG1044 Protein 1e-30 41