Gene Information

Name : ydfA (BSU6051_05340)
Accession : YP_007532469.1
Strain : Bacillus subtilis 6051-HGW
Genome accession: NC_020507
Putative virulence/resistance : Resistance
Product : putative metal-anion antiporter protein YdfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 579886 - 581193 bp
Length : 1308 bp
Strand : +
Note : Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15849754, 16850406; Product type pt: putative transporter

DNA sequence :
TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATTGGTCATATGGCAGCCGAAAAATTTATCTAT
AGGGTGGTCAGCCTGTGGAGGCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTAACTGTGACAG
GGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAA
TGGGCAGCGCTTCATATGGCTAAGGCTGCAAAAGGATACGGTGTGCGGATGTTCGTTTATGTATCTCTATTAGGAGCTAT
CGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT
TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCTTCCTTTTGTAGTAAGC
AATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTGTCCCGTACCT
GTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGG
TTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGGGCTGCTGTTAATTGGA
TATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGCAGCATTGCAATCATTTTCTTAATCGCTGCGCA
AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTTTCAATTGGCATGTACG
TTGTTGTGTATGGTGTCCGAAATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGATCAAGGATTG
TTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTCTTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGA
CGCATTGGCCATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTTATTTATGCAAATGTGATCGGTTCAGATT
TAGGGCCTAAAATAACACCGATTGGTTCCTTAGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT
TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTGTCGGCCTGTATATTTG
GCTGCTGATAATCCATTCTTGTTTCTAA

Protein sequence :
MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFE
WAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVS
NLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIG
YFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGL
FAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI
SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-127 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-123 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-129 67
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-107 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0574 Protein 2e-125 69
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0575 Protein 1e-129 68
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0578 Protein 3e-105 60
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0576 Protein 4e-106 60
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0031 Protein 4e-103 59
ydfA YP_007532469.1 putative metal-anion antiporter protein YdfA BAC0577 Protein 5e-104 58