Gene Information

Name : H924_02420 (H924_02420)
Accession : YP_007529841.1
Strain : Corynebacterium callunae DSM 20147
Genome accession: NC_020506
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 529973 - 530860 bp
Length : 888 bp
Strand : -
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGCACCGCGATAATTCCGAGGCAGCGGTGATCGTGTGGTCTATGCGTATTCCGCGCACCGTGGTTGGCATTTTGGTGGG
CGCGGCCTTTGGCGTTGCTGGCGCGCTGATCCAAGCCCTGACCCGCAATCCCCTGGCGGATCCCGGCATCCTCGGTGTTA
ATGCAGGCGCAGGTTTTGCGGTTACCCTCGGAGTAGGGTTTTTTGGGCTGAGCAGTGTCAGCGGTTATATCTGGTTTGCT
TTCATCGGCGCTGCGGTGGCCACCGCCCTGGTTTATCTCATTAGCGCTGGCGGCGGACTAGGTGCCAGTAGCAGCGCACA
GCCAATAACGCTGGTACTCGCCGGTGTGGCGCTGGCGGCAGTATTGGGTGGCATCACCACCTTTTTAACGCTAATTAACC
CCGATACTTTTCAAAGTGTGCGAAATTGGAACCTTGGTTCCATCGCCCGCACCGATCTGCATGATTCTTTTTCTGTTGCG
CCATTTATTGCGGTTGGCTTGATCATTGCGTTCCTGTTGTCTGGAGCTCTAAATTCCATTGCTCTTGGAGATGACCTTGC
AGCTTCCTTGGGCACTCGTGTTTTCCGCACCCGCGTGCTGGGAATTATTGCTTTGACGCTGCTGGCCGGCGGTGGCACCG
CACTGACCGGCGGCATTAGCTTTGTGGGTTTAATGATTCCCCATATTGTGCGTTGGATTGTGGGACCTGATCAACGCTGG
ATTATTGCTTATTCTGCACTGAGTGCCCCCGTGCTCGTGCTCGCAGCTGATGTGATCGGCAGGGTTATTGCGCGCCCGGG
CGAAATTGAAGTTGGCATTGTCACCGCCGTTATCGGCGCCCCAGTGCTCATTGCACTGGTTCGAGGAAAGAAAGCGAGCG
GGATCTAG

Protein sequence :
MHRDNSEAAVIVWSMRIPRTVVGILVGAAFGVAGALIQALTRNPLADPGILGVNAGAGFAVTLGVGFFGLSSVSGYIWFA
FIGAAVATALVYLISAGGGLGASSSAQPITLVLAGVALAAVLGGITTFLTLINPDTFQSVRNWNLGSIARTDLHDSFSVA
PFIAVGLIIAFLLSGALNSIALGDDLAASLGTRVFRTRVLGIIALTLLAGGGTALTGGISFVGLMIPHIVRWIVGPDQRW
IIAYSALSAPVLVLAADVIGRVIARPGEIEVGIVTAVIGAPVLIALVRGKKASGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-21 44
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-21 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 7e-20 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 7e-20 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 7e-20 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 7e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H924_02420 YP_007529841.1 cobalamin/Fe3+-siderophores transport system, permease component VFG0926 Protein 7e-27 51