Gene Information

Name : H924_11235 (H924_11235)
Accession : YP_007531578.1
Strain : Corynebacterium callunae DSM 20147
Genome accession: NC_020506
Putative virulence/resistance : Virulence
Product : endopeptidase Clp ATP-binding chain C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2424188 - 2426971 bp
Length : 2784 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGTTCGAGAGGTTTACCGATCGTGCACGCCGCGTGATTGTGCTCGCGCAAGAAGAGGCGCGCATGCTCAACCACAATTA
CATTGGCACCGAGCACATTCTGCTCGGCCTCATCCACGAGGGTGAGGGTGTAGCCGCTAAGGCTTTGGAGTCCATGGGTA
TTTCCCTGGACGCTGTTAGGCAAGAAGTTGAAGAGATCATTGGACACGGCACTCAGCCAACCACTGGTCATATTCCTTTT
ACTCCCCGCGCTAAGAAGGTTTTGGAGCTCAGCCTCCGCGAAGGTCTGCAGATGGGACACAAGTACATCGGTACTGAGTT
CCTTTTGCTCGGCCTGATTCGTGAGGGCGAGGGCGTCGCTGCTCAGGTTTTGGTCAAGCTTGGTGCTGATCTGCCTCGCG
TACGCCAGCAGGTTATTCAGTTGCTTTCCGGTTATGAAGGCGGTCAGGGTGGTTCCCCTGAGGCCGGCCAGAGCGCTCCA
GGTGCTGGAGATGCCGTTGGTGCAGGTGCTGCTCCTGGTGGTCGTCCTACCTCCGGTGGTGTGGGCGAGCGCTCTACTTC
ACTAGTGTTGGATCAGTTTGGTCGTAACCTGACCCAGGCTGCCAAGGATGGCAAGCTGGATCCAGTTGTTGGTCGCGATA
AGGAAATTGAGCGCATTATGCAGGTGCTCTCCCGTCGTACCAAGAACAACCCAGTGCTTATTGGTGAGCCTGGCGTTGGT
AAGACCGCCGTTGTTGAGGGTCTGGCATTAGATATCGTTAATGGCAAGGTTCCTGAGACCTTGAAGGACAAGCAGGTTTA
TTCTCTAGACCTCGGTTCTTTGGTTGCAGGTTCCCGTTACCGTGGTGACTTCGAAGAGCGCCTGAAGAAGGTTCTTAAGG
AGATCAACCAGCGCGGTGACATCATCCTCTTTATCGATGAGATCCACACCTTGGTTGGTGCTGGTGCAGCTGAGGGTGCA
ATTGACGCCGCTTCTTTGCTGAAGCCAAAGCTGGCTCGTGGTGAGCTGCAGACCATCGGTGCTACCACTCTTGATGAGTA
CCGTAAGCACATCGAAAAGGATGCGGCCCTTGAGCGTCGTTTCCAGCCAGTTCAGGTTCCTGAGCCTTCTGTTGAGCTGA
CCATTGAGATCCTTAAGGGTCTGCGCGATCGTTATGAGGCACACCACCGTGTCTCCATTACCGATGGCGCGCTGGCTGCT
GCAGCTCAGCTTGCTGATCGTTATATTAATGACCGCTTCTTGCCAGATAAGGCCGTTGACCTTATCGATGAAGCAGGTGC
ACGCATGCGCATTAAGCGTATGACTGCTCCTGAGTCTCTGCGCGAAGTTGATGAGCGCATTGCTGATGTCCGTCGTGAGA
AGGAAGCAGCAATTGATGCTCAGGACTTCGAAAAGGCAGCTGGCCTGCGCGATAAGGAGCGCAAGCTAGGCGAAGAGCGC
GCTGAGAAGGAAAAGCAATGGCGTTCTGGTGATCTTGAAGAGATCGCAGAAGTCGGCGAAGAGCAGATCGCAGAAGTTCT
GGCCAACTGGACCGGTATTCCTGTCTTCAAGCTCACCGAGGCTGAGTCCTCCCGCCTGCTCAACATGGAAGAGGAGCTGC
ACAAGCGCATCATCGGTCAAAATGATGCAGTTAAGGCAGTGGCTCGTGCAATCCGTCGTACCCGTGCAGGCCTGAAGGAT
CCTAAGCGTCCTTCCGGTTCCTTCATCTTCGCTGGTCCTTCCGGTGTTGGTAAGACGGAGCTGTCCAAGGCTTTGGCTGG
CTTCCTCTTCGGTGACGATGATGCCCTCATCCAGATCGACATGGGCGAGTTCCACGACCGCTTCACCGCGTCTCGACTCT
TCGGTGCCCCTCCGGGATACGTTGGCTATGAAGAAGGTGGCCAGCTGACTGAGAAGGTTCGCCGCAAGCCATTCTCTGTG
GTGCTTTTCGACGAAATCGAGAAGGCTCACAAGGAGATCTACAACACCTTGCTGCAGGTGCTAGAAGATGGACGTCTGAC
CGACGGCCAGGGTCGCGTAGTGGACTTCAAGAATACTGTTCTTATCTTCACCTCCAACCTGGGTACCTCTGATATCTCCA
AGGCTGTGGGCTTGGGCTTCTCCGGTTCTACCGCTACCGATACGGAAGCACAGTATGACCGCATGAAGAACAAGGTCAAC
GATGAGCTAAAGAAGCACTTCCGCCCTGAGTTCCTGAACCGTATTGATGAGATCGTGGTCTTCCACCAGCTCACCAAGGA
TCAGATCATTCAGATGGTGGATCTGCTTATCGGCCGTGTCTCCAAGGCTCTTGCTGACAAGGATATGAGCATCGAGCTTT
CCGATAAGGCTAAGGCTTTGCTGGCAACTCGTGGCTTTGATCCAGTACTGGGTGCACGTCCATTGCGTCGTACCATTCAG
CGGGAGATCGAGGACCAGATGTCTGAGAAGATCCTCTTTGGTGAAATCGGTGCCGGCGAGATCGTCAGCGTGGATGTTGA
AGGCTGGGATGGCGAGTCCAAGGATACGGACAAGGCCAAGTTCACCTTCACCCCTCGCCCAAAGCCACTGCCAGAGGGTA
AGTTCTCGGAGATCTCCGTGGAAGCAGCAGAAGCTATTAAAGATGTAGATTCTGCAGCCGACGGCGACGTTCCAGAGACT
GATTCCCTGGATGGCATTGACATCGATCAGCTTGAAAAGCTCGATGCTGATGCTGAGCAGGGCACTGATATCGACCGTGG
ATCCAATGATTTCTACGGCACCGACGGTCAGTCCGGTGGCGCAGCGCCACAGCGCGAGCAGTAA

Protein sequence :
MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGHGTQPTTGHIPF
TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPEAGQSAP
GAGDAVGAGAAPGGRPTSGGVGERSTSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVG
KTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGA
IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTIEILKGLRDRYEAHHRVSITDGALAA
AAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKLGEER
AEKEKQWRSGDLEEIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEEELHKRIIGQNDAVKAVARAIRRTRAGLKD
PKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV
VLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTSDISKAVGLGFSGSTATDTEAQYDRMKNKVN
DELKKHFRPEFLNRIDEIVVFHQLTKDQIIQMVDLLIGRVSKALADKDMSIELSDKAKALLATRGFDPVLGARPLRRTIQ
REIEDQMSEKILFGEIGAGEIVSVDVEGWDGESKDTDKAKFTFTPRPKPLPEGKFSEISVEAAEAIKDVDSAADGDVPET
DSLDGIDIDQLEKLDADAEQGTDIDRGSNDFYGTDGQSGGAAPQREQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H924_11235 YP_007531578.1 endopeptidase Clp ATP-binding chain C VFG0079 Protein 0.0 58