Gene Information

Name : xerD (H924_06545)
Accession : YP_007530656.1
Strain : Corynebacterium callunae DSM 20147
Genome accession: NC_020506
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1409278 - 1410192 bp
Length : 915 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGAGTGTCGCAGCAACCGTCAAAACCTGGCTCACGCATCTGGCTGTGGAGCGCGGGCTTTCGGATAATACGCTGAAGAG
TTATCGGCGGGATTGCGCGCGATATGCGGAATGGCTGGAGCGCGCTGGCATCGAAGAATTAGGCGATGTCACTACCTCCC
ATGTGGAAAATTACGTCATGGATCTGAGGCGTGGAGTGGATGGGCGCCAACCACTTTCAGCTTCTTCGGCAGGCCGGGCG
TTGATTGTAGCACGTGGTTTACACAAATTTGCACTCGCTGAAGGCCTAGTTAAGTTTGACGTCGCGGCGGAAGTTTCGCC
TCCGGCAACTGGTCGCCATCTACCCGATACTTTGAGCATTGAGGAAGTGGGTGCCTTGATTGACGCGATTCCTACCTCAG
ATATTGCTACTCCAGTAGATATCAGGGATAGAGCCTTGATTGAGGTACTTTATGGCACTGGTGCGCGTATCTCTGAGGCC
GTGGGTTTAGTGGTTGATGATGTTGCCGATAGGCCCGAGGTTTTAAGAATCCTGGGCAAGGGTTCCAAGCAGCGCATTGT
ACCTTTTGGGTCAATGGCTAAGAAGGCGGTGGAGGACTACCTCACACGTGCGCGGCCTGCATTGTCCAAGGGTAAAAGCC
ATGCGCTTTTTCTCAACCAACGCGGTGGAGAGCTCTCGAGGCAGTCAGCGTGGGCGGTGTTGAAGAAAGCCGTGCAAAGG
GCAGGGCTAGATAAGGATATTTCCCCGCACACCCTGCGTCATAGTTTTGCCACGCACCTTTTAGAGGGCGGGGCAGATGT
GCGTGTGGTGCAAGAGCTCTTAGGGCATTCCTCGGTGACAACTACGCAGATTTACACTCATGTCAGCGCCGAAAATTTGC
GTCAGGTTTGGCGCGAATCTCACCCCCGGGCATAA

Protein sequence :
MSVAATVKTWLTHLAVERGLSDNTLKSYRRDCARYAEWLERAGIEELGDVTTSHVENYVMDLRRGVDGRQPLSASSAGRA
LIVARGLHKFALAEGLVKFDVAAEVSPPATGRHLPDTLSIEEVGALIDAIPTSDIATPVDIRDRALIEVLYGTGARISEA
VGLVVDDVADRPEVLRILGKGSKQRIVPFGSMAKKAVEDYLTRARPALSKGKSHALFLNQRGGELSRQSAWAVLKKAVQR
AGLDKDISPHTLRHSFATHLLEGGADVRVVQELLGHSSVTTTQIYTHVSAENLRQVWRESHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-44 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-44 46