Gene Information

Name : B649_10610 (B649_10610)
Accession : YP_007529128.1
Strain : uncultured Sulfuricurvum sp. RIFRC-1
Genome accession: NC_020505
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2119559 - 2121235 bp
Length : 1677 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
ATGATCCGACAACAAGTACGATTGGGAGATTTGCTCATTTCCGAGGGGCTTATTAGCGCTGATCAGCTCGAGCATGCCCT
CCAACAGCAAAAAGAGTCCGGTTACAGCAAAAAACTGGGGGAAGTTCTCGTTGATGAGGGGATGGTATCGCATAAAGAGA
TGGCCCTGCTCCTCTCTAAACAACTCAAAATCGATTTTGTCGACCTCTTCGGTGAAAAGATCGATTTCCAATCTCTCGCC
AAATTTTCCATCTCTTTGCTCACAGCCGCCAAAGCAATCCCGTTTAAAGAAGATGAGGATTACGTCTATATCGCCACCTC
CGATCCGTTAAACTTCGATGCTCTCGAAGCGCTGGAGCGTAATATCGCGACCAAACCAATCAAGGTTTTTTTATCGCTGA
GCGAAGACATTGCTCATATTTTTCAACGTCTTGAAATCATCAAAAAAACTCAGAGTATCGCCGCAGAAGTTAAAAAAGAG
ATTAATAATGAAGGGTCCAAAGGGGTCGATGGTGATGCCAGTGCCGTTATGCAGCTCATCAATCTTATCATTAAAGATGC
AGTTTTGCGACGAGCCAGTGACATCCATATCGAACCGGAGCTGCGTTCCATGTCGGTGCGAGCACGTGTCGATGGAATCT
TACAAGAGACTTTCGTCTTTGATTTGGATATTTATACGGCGCTTAATTCACGCATTAAACTTTTGGGAAATCTCGACATT
TCTGAACGACGGAAAGCCCAAGACGGTCGCTTTAGCCTCGATGTTGCGGGGGGAAAATACGATTTCCGTCTCTCCAGTAC
CCCAACCTTGTTCGGGGAATCAATCGTTATGAGGATTTTGGATCAACAAAAGATTCTTCTTAAACTTCATGAACTTGGAT
TTGAAAATAAAAATCTAGAGAAGTTCAATGAAATCATCCACGCACCATTCGGTATTGTCCTCATCACAGGCCCGACCGGA
AGCGGTAAAACGACCACCCTTTATGCGGCACTCAATGAAGTAAAAAGTATCGAAAATAAAGTTCTCACAATCGAAGATCC
TATCGAGTATCAACTTCCTCTGGTACAACAGGTTCAAGTCAATGAGCGGGTAGGCTTTAGTTTCCTCGAAGCGCTAAAAT
CCTTTTTACGACAAGACCCTGATATCATCCTCGTAGGGGAGATTCGCGATTTTGAAACCCTCAATTCCGCAGCACAAGCG
TCATTGACGGGTCACCTTGTTTTCTCAACACTTCATACCAACGATGCGCCAAGTGCGATTGGACGGATGGTTCAGATGGG
ATTACAAAGCTATCTTATTGCCGATTCACTGGTCGGAATCGTTGCACAGCGATTGGTACGTAAAATCTGTAATGAATGTA
AAATGGAGATTAAACCGCACAAAAATCTTCTCCGCCGTGTCGAGCGCTGGATTAGCGAAGATGCAAAATTTTATGCCGGA
AAAGGGTGTCCGAAATGCAATAATACCGGTTATTCCGGGCGGATTTTGATCTCTGAAATTTTGATGGTCAATGAAACCAT
TGCCAAAATGGTTGCCGATGAAGCATCCAAATACGAAATTTCCCGTTATGCCCAAGAGAATGAAGGATTTGAACCGATGG
TCATTGATGGACTCAGCAAAACACTACGCGGTATCACCACCCTCGAAGAGATTCTCCGTGTCACAAAAGAGCTGTAA

Protein sequence :
MIRQQVRLGDLLISEGLISADQLEHALQQQKESGYSKKLGEVLVDEGMVSHKEMALLLSKQLKIDFVDLFGEKIDFQSLA
KFSISLLTAAKAIPFKEDEDYVYIATSDPLNFDALEALERNIATKPIKVFLSLSEDIAHIFQRLEIIKKTQSIAAEVKKE
INNEGSKGVDGDASAVMQLINLIIKDAVLRRASDIHIEPELRSMSVRARVDGILQETFVFDLDIYTALNSRIKLLGNLDI
SERRKAQDGRFSLDVAGGKYDFRLSSTPTLFGESIVMRILDQQKILLKLHELGFENKNLEKFNEIIHAPFGIVLITGPTG
SGKTTTLYAALNEVKSIENKVLTIEDPIEYQLPLVQQVQVNERVGFSFLEALKSFLRQDPDIILVGEIRDFETLNSAAQA
SLTGHLVFSTLHTNDAPSAIGRMVQMGLQSYLIADSLVGIVAQRLVRKICNECKMEIKPHKNLLRRVERWISEDAKFYAG
KGCPKCNNTGYSGRILISEILMVNETIAKMVADEASKYEISRYAQENEGFEPMVIDGLSKTLRGITTLEEILRVTKEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-77 43
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 4e-77 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B649_10610 YP_007529128.1 hypothetical protein VFG1876 Protein 5e-77 45
B649_10610 YP_007529128.1 hypothetical protein VFG0182 Protein 9e-75 44