Gene Information

Name : B649_07905 (B649_07905)
Accession : YP_007528588.1
Strain : uncultured Sulfuricurvum sp. RIFRC-1
Genome accession: NC_020505
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1597054 - 1597749 bp
Length : 696 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACGGTGATCCCTTCTTGCGTCATCAGCTTTAGTGGTGTCACCAAATCTTACGGGGAGGGCGAAGCAACCGCCTATGC
TCTGCGCGGTGTTGATTTGGAGATTAAAAGCGGTGAATTCGTCGCGATTATGGGACCCAGCGGATCGGGGAAATCGACGG
CGATGAATATCATAGGATGTCTTGATACCCCATCACAGGGACAATATCTTTTTGAGGGAATCGATGTCGGCGGCCTCTCA
CGCGATCAACGAGCTCTTCTTCGTCGCAACTACATCGGATTTATCTTTCAAGGGTTCAATCTGCTGGGAAAAACCTCAGC
CGTTGAAAACGTCGAACTGCCGCTGCTCTATCGAGGATTCCCTGCTGATGTTCGCAGAGTAAAAGCCCTTGAAGCCCTTA
AAAGTGTCGGGCTAGAACACGTCGCCCACCACACTCCGGGTGAACTCTCAGGAGGCCAGCAGCAGCGTGTCGCTATCGCC
CGCGCGATCGTTACCGATCCGCTCGTCCTCCTCGCCGATGAGCCGACCGGAAATCTTGACACCGCAAAAAGTATCGAAAT
CATGGAACTGCTCCGATCGTTTAACCGTGATAAAGGGATTACGATCATTATGGTCACCCATGAAATCGACATGGCAGCCT
ATTCAGAGCGGACAATCCATTTTCGTGACGGACTCATCGACAGGGGGACCCGATGA

Protein sequence :
MTVIPSCVISFSGVTKSYGEGEATAYALRGVDLEIKSGEFVAIMGPSGSGKSTAMNIIGCLDTPSQGQYLFEGIDVGGLS
RDQRALLRRNYIGFIFQGFNLLGKTSAVENVELPLLYRGFPADVRRVKALEALKSVGLEHVAHHTPGELSGGQQQRVAIA
RAIVTDPLVLLADEPTGNLDTAKSIEIMELLRSFNRDKGITIIMVTHEIDMAAYSERTIHFRDGLIDRGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B649_07905 YP_007528588.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-51 54
B649_07905 YP_007528588.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-44 49
B649_07905 YP_007528588.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-36 44
B649_07905 YP_007528588.1 ABC transporter-like protein NC_012469.1.7685735. Protein 4e-36 42