Gene Information

Name : istB (BN159_0054)
Accession : YP_007518560.1
Strain : Streptomyces davawensis JCM 4913
Genome accession: NC_020504
Putative virulence/resistance : Unknown
Product : Insertion sequence IS21 putative ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 48597 - 49367 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
TTGAGCGAGCTGACCGGCAACCGCATCCGCACCACGGCCGGCAAGCTCGGCCTGCCCCATCTCGCGGAGACCATCACCGA
GTTCACCCGCCGGGCCGACGAGGCGAAGATGGGCTACCTCGACTTCCTCGACCTGGTCCTCTCCGAGGAACTCGCGGTCC
GCGACGACCGGCGCTTCCGCCAGGGCCTGCGACTGTCCCGGCTGCCGCACCACAAGACGCTCGACGAGTACGACTTCTCC
TTCCAGCCCGACCTCGACCCGCGCAAGGTCAAGGACCTCGCCACCCTCGCATTCGTCGAGGCCAAGGCCAACGCGGCCCT
GCTGGGTCCGCCCGCAGTCGGCAAGACACATATCGCTGTCGCCCTCGCGGTCGCGGCCTGCCGGGCCGGTTACTCGATCT
ACTTCACGACCCTCGACGACATGGTCCGCAACCTCAAGACCGCCGAGGCGGCCGGACGACTGGTCAACAAGCTCGGCACC
TACCTGCGGCCCAGCGTCCTCGTGGTCGACGAGGTCGGTTACCAGCCCCTCGAACGAGCCGAGGCGAACCTGGTCTTCCA
GGTGATCTCCAAGCGCTACGAGAAGGGCTCGATCATCCTGACCTCGAACAAGACCTTCAGCGAGTGGGGCCAGGTCTTCG
GCGACGAGGTCCTCGCCACCGCCATCCTCGACCGCCTCCTGCACCACTGCGAAGTCGTCTCCATCAACGGCAACAGCTAC
CGGTTGAAGAACCGCCTTCAGGCCATCGAGCGGGACACCGACGTGGCCTGA

Protein sequence :
MSELTGNRIRTTAGKLGLPHLAETITEFTRRADEAKMGYLDFLDLVLSEELAVRDDRRFRQGLRLSRLPHHKTLDEYDFS
FQPDLDPRKVKDLATLAFVEAKANAALLGPPAVGKTHIAVALAVAACRAGYSIYFTTLDDMVRNLKTAEAAGRLVNKLGT
YLRPSVLVVDEVGYQPLERAEANLVFQVISKRYEKGSIILTSNKTFSEWGQVFGDEVLATAILDRLLHHCEVVSINGNSY
RLKNRLQAIERDTDVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-44 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-44 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-44 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-44 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-44 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-44 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-44 43
unnamed CAA21402.1 - Not tested HPI Protein 3e-44 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-44 43
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-44 43
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-44 43
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_007518560.1 Insertion sequence IS21 putative ATP-binding protein VFG1606 Protein 1e-44 43
istB YP_007518560.1 Insertion sequence IS21 putative ATP-binding protein VFG1515 Protein 1e-44 43
istB YP_007518560.1 Insertion sequence IS21 putative ATP-binding protein VFG1663 Protein 1e-44 43
istB YP_007518560.1 Insertion sequence IS21 putative ATP-binding protein VFG1627 Protein 1e-44 43