Gene Information

Name : afsQ1 (BN159_3493)
Accession : YP_007521999.1
Strain : Streptomyces davawensis JCM 4913
Genome accession: NC_020504
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein AfsQ1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3948647 - 3949333 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGACCCCCGTGCCTTCCCTGTTGCTGATCGAGGACGACGACGCCATCCGCACGGCCCTGGAGCTCTCACTGACGCGCCA
GGGACACCGGGTGGCCACTGCTGCCACCGGTGAGGACGGCCTGAAGTTGCTGCGTGAGCAGCGGCCGGACCTGATCGTGC
TGGATGTGATGCTGCCCGGCATCGACGGCTTCGAGGTGTGCCGTCGTATCCGGCGCACCGACCAGTTGCCGATCATTCTG
CTCACCGCGCGCAGCGACGACATCGACGTGGTGGTCGGGCTCGAGTCCGGCGCCGACGACTACGTCGTCAAACCGGTGCA
GGGCCGGGTGCTCGACGCCCGTATCCGTGCCGTGCTGCGGCGCGGGGAGCGGGAGTCCAACGATGCGGCGGCCTTCGGCA
GCCTGGTCATCGACCGGGCCGCGATGACGGTCACGAAGAACGGCGAGGACCTCCAGCTCACCCCGACCGAGCTGCGGCTG
CTGCTGGAGCTGAGCCGGCGGCCCGGACAGGCGCTGTCCCGGCAGCAGTTGCTGCGGCTGGTGTGGGAGCACGACTACCT
CGGTGACTCCCGGCTGGTGGACGCCTGTGTGCAGCGGCTGCGCGCCAAGGTCGAGGACGTGCCCTCGTCCCCGACGCTGA
TCCGTACGGTCCGTGGTGTCGGCTACCGCCTGGACGCGCCTCAGTGA

Protein sequence : 
MTPVPSLLLIEDDDAIRTALELSLTRQGHRVATAATGEDGLKLLREQRPDLIVLDVMLPGIDGFEVCRRIRRTDQLPIIL
LTARSDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGERESNDAAAFGSLVIDRAAMTVTKNGEDLQLTPTELRL
LLELSRRPGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDAPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 AE000516.2.gene3505. Protein 1e-34 47
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002952.2859905.p0 Protein 1e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002951.3237708.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_003923.1003749.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002758.1121668.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_007622.3794472.p0 Protein 1e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_009641.5332272.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_013450.8614421.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_007793.3914279.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002745.1124361.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_009782.5559369.p0 Protein 2e-37 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_012469.1.7685629. Protein 3e-39 43
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_003923.1003417.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_013450.8614146.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002951.3238224.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_007793.3914065.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002758.1121390.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_010079.5776364.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_002952.2859858.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_007622.3794948.p0 Protein 7e-32 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 BAC0197 Protein 6e-26 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 BAC0125 Protein 7e-24 41
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 NC_012469.1.7686381. Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 VFG0596 Protein 3e-24 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 VFG1389 Protein 7e-23 42
afsQ1 YP_007521999.1 Transcriptional regulatory protein AfsQ1 VFG1390 Protein 2e-27 41