Gene Information

Name : S58_08800 (S58_08800)
Accession : YP_007510478.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 990360 - 990863 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGGGATGGATGGAATGTCTTGATGTCGTGAAGCTGCGCGTGGCCGCGTGGCGCGGGCAATTCCGGCTTCGTTTACG
CAGAGGCCGCGATGGCGAGGCAGGCTTCACCTTGGTCGAGATGCTGGTCGTCATCACCATCATCGGCCTGATCATGGGTC
TCGTCGGCCCGCGCGTGCTGAGCTATCTCTCCGACTCCAAGCTCAAGACGGCGCGGATCCAGATCCGCAGCCTGTCCTCG
GCGCTCGACCTCTATCACCTTGACAACGGCCGCTACCCGACCGCAGCCGAAGGGCTCGGTGCGCTGGTGCAGAAGCCGGC
CACCGCGACCACCTGGAACGGACCCTATCTCAGCGGCACCCTGGTCCCGAACGATCCGTGGGGACGGCCTTATGTCTACA
GATTCCCGGGGCAGCACGGCACCTACGACATCGTCTCGCTCGGGCCCGAGGGACGTGAGGACGAGACCTCGGCCACGGCC
AATGTGACGAGCTGGCAGCCGTGA

Protein sequence : 
MLGWMECLDVVKLRVAAWRGQFRLRLRRGRDGEAGFTLVEMLVVITIIGLIMGLVGPRVLSYLSDSKLKTARIQIRSLSS
ALDLYHLDNGRYPTAAEGLGALVQKPATATTWNGPYLSGTLVPNDPWGRPYVYRFPGQHGTYDIVSLGPEGREDETSATA
NVTSWQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-23 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_08800 YP_007510478.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 7e-25 41
S58_08800 YP_007510478.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 5e-24 41