Gene Information

Name : S58_72320 (S58_72320)
Accession : YP_007516783.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : type III secretory pathway, component EscV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8205296 - 8207296 bp
Length : 2001 bp
Strand : +
Note : -

DNA sequence :
ATGACGGCCATTGTCGAGAGCTTGACCCGCTGGTCGAACGACAAGCGTGAGCTTCTCGTCGTGATCCTGATCATCACCAC
GATCATGGCGATGATCCTGCCGATTCCGACGGCGCTCGTCGACGTCATGGTGTCCGTCAACATCGGCGTATCGATTCTGC
TGCTGATGGTGGCATTCTACTTGAACGCCGCGGTGGAGTTCTCCGCGCTTCCGGCAATCATCCTCATCTCCACGGTGTTC
CGGCTCTCCATTTCCATCACCATCACGCGCCTGGTGCTCAGCCAGGCCGATGCGGGGTCCATCGTTCAGACCTTTGGCGA
GTTCGTCGTTTCCAGCAACGTCGTGGTTGGGCTCGTGGTGTTCCTGATCATCACGATCGTCCAGTTCGTCGTCATCACCA
AAGGATCTGAACGGGTCGCCGAAGTTGCCGCCCGATTCACGCTCGATGCGCTGCCGGGTAAGCAAATGAGCATCGATGCC
GACCTCCGCAACGGCGACATCAACCAGGCCGAGGCCCGGCGCCGCCGACGGCGGCTGGAGCGCGAGAGCCAGCTGTACGG
AGCGATGGACGGCGCCATGAAGTTCGTCAAAGGTGATGCGATCGCCGGTCTCATCATCATCGCCGTCAACCTCGTTGGCG
GCATTGTGGTCGGCACCGTGCAGCACAGGCTGCGTATTGGCGAAGCGATCCAGCTCTACTCGCTGTTGACGATCGGCGAC
GGCCTAGTCTCCCAAGTCCCCGCGCTGTTCGTGTCGATGGCGGCGGGAACGGTCGTGACCCGGGTTGCGACAGAAGCGGC
GAGCAATCTTGGCTCCGAGATCATGGAGCAGATCACGTCGCAGCCGCAATCCCTGCAACTGGCCGGTCTCATGATGCTGG
GGTTGGCCTTCGTACCGGGTTTTCCGGCGCCGATTTTCCTTTTTATGGCGACGGTGTTCGGCGGCTCCGGCCTCGCGATG
CTCTTGGCTCGGCGGCGCGCACATCGAACCTCCGGCACGGCGCTACCGTCCGACCCGTCAGAGCCCACGAGAAGTTCGCG
GATCGCGATCCCGGCGACCAGGTCTGCGCCGATCATGATCCTCGCGGAAGCCGCCTTGTGCGATGAACTCCGGCGAGCCG
GTATCCATGATCGGATCAGGCGGACACGACAGGACGTGGCCGACTGGCTCGGATGCGCTTGTCCCGGGGCCGCGCTCGAC
GAAAGCAGCGCCCTGGCGCCCGGTCATTTCAGGATCGAGCTGCATGGCGTGCCTCTTCTGCTCTCGTCCGGAGAGCTGGA
TCAGCCGGCAACCGGAACGGCTGGGGCGCCGGCCATGTCCGCAGTGGATGCCGAGCTCCGGCGTGTTCTCGTCCGCTATG
CCCCCGAGTTCCTCGGCATACAGGAGACCAAGCGCCTGCTCAACCAGTTGGAGGCCGACTACGCCGACCTGGTGCGCGAG
GCCTTGCGCGTGGTTCCTACACAGCGCATCACCGATGTCCTTCGCCGTCTGCTCGACGAGCGGGTCTCCATCCGCAATCT
GCGGCTGATCCTGGAGACGCTGGCCGAGTGGGGCATGCGGGAGCAGAGCAGCATCATGCTGGTCGAACACGTGCGGCTGG
CGCTGCGCCGGCAAATCTGCTTCGAATGTTCAGGCATTGATCGGACCTTGCGCTGCTTCGTGCTTGATCGACAGACAGAG
GAAGCGATCCGTGTGGCCGTGCACGCTCTTGATGAAAACACTCAGACGTCTCTCGATCCGGCCGTCAGCACGCGCCTGCT
TGATGCGTTGATCCGGCAGCTTCCCGCTGTCGATCATCTTGCCGCATCGCCGAGTATCGTACTGGCCTCCGCCGACCTGC
GCCGGGTGGTCTGGACTCTGCTCGCGCCGTCCGGTCTCAACGTGGTTGTGCTCTCTTATCAAGAAATCTCAAAGGACTTT
CGGCTCGAGCCGATTGCCGTCCTTGGGTTGGATGAATCACGCGAGCAGGCTGAACCTTCCCCGATCCCGGCGATGCAATG
A

Protein sequence :
MTAIVESLTRWSNDKRELLVVILIITTIMAMILPIPTALVDVMVSVNIGVSILLLMVAFYLNAAVEFSALPAIILISTVF
RLSISITITRLVLSQADAGSIVQTFGEFVVSSNVVVGLVVFLIITIVQFVVITKGSERVAEVAARFTLDALPGKQMSIDA
DLRNGDINQAEARRRRRRLERESQLYGAMDGAMKFVKGDAIAGLIIIAVNLVGGIVVGTVQHRLRIGEAIQLYSLLTIGD
GLVSQVPALFVSMAAGTVVTRVATEAASNLGSEIMEQITSQPQSLQLAGLMMLGLAFVPGFPAPIFLFMATVFGGSGLAM
LLARRRAHRTSGTALPSDPSEPTRSSRIAIPATRSAPIMILAEAALCDELRRAGIHDRIRRTRQDVADWLGCACPGAALD
ESSALAPGHFRIELHGVPLLLSSGELDQPATGTAGAPAMSAVDAELRRVLVRYAPEFLGIQETKRLLNQLEADYADLVRE
ALRVVPTQRITDVLRRLLDERVSIRNLRLILETLAEWGMREQSSIMLVEHVRLALRRQICFECSGIDRTLRCFVLDRQTE
EAIRVAVHALDENTQTSLDPAVSTRLLDALIRQLPAVDHLAASPSIVLASADLRRVVWTLLAPSGLNVVVLSYQEISKDF
RLEPIAVLGLDESREQAEPSPIPAMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcV AAP34346.1 HrcV Virulence Hrp PAI Protein 8e-72 41
XC_3013 YP_244081.1 HrcV protein Virulence Hrp PAI Protein 5e-72 41
hrcV NP_636603.1 protein HrcV Virulence Hrp PAI Protein 5e-72 41
hrcV BAB07859.1 HrcV Virulence Hrp PAI Protein 5e-72 41
hrcV NP_640760.1 HrcV protein Virulence Hrp PAI Protein 9e-72 41
hrcV YP_198723.1 protein HrcV Virulence Hrp PAI Protein 7e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_72320 YP_007516783.1 type III secretory pathway, component EscV VFG0064 Protein 2e-98 44