Gene Information

Name : S58_72180 (S58_72180)
Accession : YP_007516769.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8195246 - 8195527 bp
Length : 282 bp
Strand : -
Note : -

DNA sequence : 
ATGGGGGAGGCAATGGGTCAAGCGACGATCGTCGATCATCTGGTCAGGGGTCTGACCGTCGTTCTCATCTTTGCCATGCC
TCCCCTGGGTGTGGCGATGGTTGTTGGCCTGTTGGTTTCAATCCTTCAGGCCGCAACCCAGATCCAGGACCAGGTGCTGC
CGCAGACGATCAAACTGATCGCCGTCGTGGCCACGCTGGCGGTGTTCGGCGCAGTGCTGGCGGCACCGCTGATCCAATAT
ACCGATCAGATCCTCGCGGATTTTCCTTCACTGACGCGTTGA

Protein sequence : 
MGEAMGQATIVDHLVRGLTVVLIFAMPPLGVAMVVGLLVSILQAATQIQDQVLPQTIKLIAVVATLAVFGAVLAAPLIQY
TDQILADFPSLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAG33885.1 HrcS Virulence Hrp PAI Protein 2e-07 51
hrcS NP_791221.1 type III secretion protein HrcS Virulence Hrp PAI Protein 3e-07 51
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 1e-06 50
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 0.004 50
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 0.004 50
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 1e-06 50
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 5e-04 44
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 5e-04 44
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 4e-04 44
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 5e-04 44
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 5e-04 44
lscS AAO18039.1 LscS Virulence TTSS locus Protein 1e-06 44
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 2e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_72180 YP_007516769.1 hypothetical protein VFG0395 Protein 1e-08 47
S58_72180 YP_007516769.1 hypothetical protein VFG0520 Protein 1e-04 44