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Name : S58_67950 (S58_67950) Accession : YP_007516349.1 Strain : Bradyrhizobium oligotrophicum S58 Genome accession: NC_020453 Putative virulence/resistance : Resistance Product : tetracycline efflux transporter Function : - COG functional category : - COG ID : - EC number : - Position : 7692373 - 7693560 bp Length : 1188 bp Strand : + Note : - DNA sequence : ATGAGCAAGCCTCTTGCCGTCATCTACCTCACCATCGTGCTCGATGCCGTCGGCATCGGGCTGATCTTTCCCATCCTGCC TTCGCTGCTGCAGGAGGTGACGCACGCCGACAACGTGGCGTCCACGCTCGGCATCCTGACTGCGCTCTACGCAGCCATGC AGTTCGTCTGCGCGCCGGTGCTCGGCTCGCTCAGCGACCGGCTCGGCCGGCGCCCGCTGCTGCTGGTCTCGCTGGCCGGC GCCACCGTCAACTATGTGTTCCTCGCCTTTGCATCCGATCTCTGGATGCTTCTGCTCGGCCGCGCCGTCGCCGGCGTCAC CAGCGCCAACGTCTCGGTCGCCACCGCCTACATCACCGACATTTCCGCCGAGGAGGAGCGGGCCCGCCGCTTCGGACTTC TCAACGCGATGTTCGGCCTCGGATTCATCATCGGTCCCGTGCTTGGCGGCACGCTCGGCGATCATTGGCTGCGGCTGCCG TTCGTCGTGGCGGCGGTCCTGAACGGATGCAATCTCCTGCTGGCGCTTGCGACGTTGCCGGAGTCGCACGCGCCGAGCCG CGCGCCGATCGAGATCGCCGTCCTGAACCCGCTGCGGCCGCTGCGCTGGGCATTCTCGGCGAAAGGCCTGCTGCCCATCG TGGCCGTTTTCTTCCTGTTCAGCGCGACCGGCGAGGCCTACGGCGTCTGCTGGGCGCTGTGGGGCGGCGATACGTTCCGG TGGAACGGCCTGTGGATCGGCCTCTCGCTGGGCACCTTCGGCGTGTTCCAGACGCTCGCACAGGCATTCCTGCCCGGCCC CGCCGTGAGGCTGTTGAGCGAACGTGGCGCCATCCTCACCGGGATCGCCGGCGTCTGCATCGCCCTCACGTCGCTGGCAT TCGCCAGCCGGAGCTGGATGGTGTTTGCCATCATGCCGATGTTCGCGCTCGGCGGCATCGGCGCGCCGGCCCTGCAGTCC ATCGCCACGCGGCACGTGGACAGCGAACTGCAAGGACAGCTCCAGGGCGTCCTCGCCTCGACGGTGAGCCTCGCATCGAT CGTTGCGCCACTCGGATTCTCCAGCATGTACTTCGTCGTCCGAGAGCAATGGCCCGGCGCCATCTGGCTGTCCGTCGTTG CCATCTACGTCCTCATCGTTCCCTTCGTCCTGTGGCTGCGGCCGGCCAAGGCGACATCCGGGCTCTGA Protein sequence : MSKPLAVIYLTIVLDAVGIGLIFPILPSLLQEVTHADNVASTLGILTALYAAMQFVCAPVLGSLSDRLGRRPLLLVSLAG ATVNYVFLAFASDLWMLLLGRAVAGVTSANVSVATAYITDISAEEERARRFGLLNAMFGLGFIIGPVLGGTLGDHWLRLP FVVAAVLNGCNLLLALATLPESHAPSRAPIEIAVLNPLRPLRWAFSAKGLLPIVAVFFLFSATGEAYGVCWALWGGDTFR WNGLWIGLSLGTFGVFQTLAQAFLPGPAVRLLSERGAILTGIAGVCIALTSLAFASRSWMVFAIMPMFALGGIGAPALQS IATRHVDSELQGQLQGVLASTVSLASIVAPLGFSSMYFVVREQWPGAIWLSVVAIYVLIVPFVLWLRPAKATSGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-78 | 50 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-78 | 50 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-77 | 50 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-78 | 50 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 8e-78 | 50 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 6e-78 | 50 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-64 | 44 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 2e-62 | 44 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 2e-62 | 44 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 2e-62 | 44 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 2e-62 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_011586.7043399.p0 | Protein | 2e-101 | 58 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_011595.7059241.p0 | Protein | 4e-102 | 58 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_010410.6003291.p0 | Protein | 5e-102 | 58 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_009085.4918440.p0 | Protein | 1e-96 | 57 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | X75761.gene.p01 | Protein | 5e-77 | 50 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF090987.gene.p01 | Protein | 2e-77 | 50 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF534183.gene.p01 | Protein | 3e-78 | 50 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_010410.6002597.p0 | Protein | 4e-78 | 50 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | CP001485.1.gene2821. | Protein | 4e-78 | 50 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | Y19114.gene.p01 | Protein | 5e-79 | 49 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_011586.7045189.p0 | Protein | 5e-72 | 49 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AY264780.2.gene3.p01 | Protein | 2e-78 | 47 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF133140.gene.p01 | Protein | 9e-65 | 44 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | NC_010410.6002612.p0 | Protein | 9e-65 | 44 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AY743590.gene.p01 | Protein | 4e-72 | 43 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF070999.gene.p01 | Protein | 4e-62 | 42 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF133139.gene.p01 | Protein | 5e-65 | 42 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AF121000.gene.p01 | Protein | 1e-63 | 42 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | Y19116.gene.p01 | Protein | 4e-54 | 41 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | L06940.gene.p01 | Protein | 3e-55 | 41 |
| S58_67950 | YP_007516349.1 | tetracycline efflux transporter | AJ420072.gene.p01 | Protein | 4e-57 | 41 |
