Gene Information

Name : S58_66220 (S58_66220)
Accession : YP_007516176.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7486026 - 7487663 bp
Length : 1638 bp
Strand : -
Note : -

DNA sequence :
ATGGATGCGATCAGCCAGCCGCTGCTCTCGGTCAGGGATCTCTCGGTGGCCTTCCACCAGGGAGGCCGCGTGTCGACCGC
CGTCGACCGCGTCTCGTTCGACATCAAGCGCGGCGAATGCATCGCCTTGGTCGGTGAATCCGGCTCGGGCAAATCGGTCA
GCGCGCTGTCGGTGCTGAAGCTCCTGCCGTATCCGGTCGCCTCGCACCCGTCGGGCAGCATCCGCTTCAAGGGCCGCGAT
CTGCTGCCCTTGTCGGAAGGCGAGATGCGCGAGCTCCGCGGCAGCGACATCTCGATCATCTTCCAGGAGCCGATGACCTC
GCTCAATCCGCTGCACACGATCGAGCGGCAGATCAGCGAGATCCTGCAGCTGCATCAGCCGATCTCCAACAGCGCCGCAC
GGACGCGCGTGCTGGAACTGCTCACCCAGGTCGGCATCCCCGAGCCGGAGACGCGGCTCGGCAGCTATCCACATCAGCTC
TCCGGCGGCCAGCGCCAGCGCGTGATGATCGCGATGGCGCTCGCCAACGAGCCGGACCTCCTGATCGCCGACGAGCCGAC
TACCGCGCTCGACGTCACCGTGCAGGCGCAGATCCTGGCGCTGCTCGCCGATATCCGCGCGCGGCTCGGCATGAGCCTGC
TGTTCATCACCCATGATCTCGGCATCGTCCGCCGCATCGCCGATCGTGTCTGCGTCATGAATGGCGGCAAGATCGTCGAG
CAGGGGCCGGTCGAGCAGGTGTTCACCGCGCCCTCGCATCCCTACACCAAGGCGCTGCTCGCGGCCGAGCCGAAGCCGGA
CCCGGCGCCGCCGCGGCCCGATCAGCCGGTGGTGATGCAGGCGCAGGATCTCAAGGTCTGGTTTCCGATCAAGCGCGGCC
TGTTCCGCTCCACGGTGGGCCACATCAAGGCGGTCGATGGCGTCAGCATTGCCGTGCGCAAGGGCGAGACGCTCGGCGTG
GTCGGCGAGTCCGGCTCCGGCAAGACCACGCTCGGGCTGGCGCTGCTGCGGCTGATCTCCTCCGACGGTCCGATCGTGTT
TCTCGGCAGCGAGATCCAGGGGCTGAGCTTCAAGCAGGTCCGCCCGTTCCGCCGTGACATGCAGATCGTGTTTCAGGACC
CGTTCGGCTCGCTCAGCCCGCGCATGTCGGTCGGCGACATCATCGCCGAAGGCTTGAGCGTGCATCAGCCCGGCCTGTCG
GAGGAGGAGGCCGAGGCGAAGGTCGTCAAGGCGCTCACCGAGGTCGGGCTCGATCCGGCGACGCGCTTCCGCTATCCGCA
CGAATTCTCCGGCGGCCAGCGCCAGCGCATCTCGGTTGCGCGTGCCGTCGTGCTCGAGCCGAGCTTCGTCGTGCTGGACG
AGCCGACCTCGGCGCTCGACATGCTGTTCCAGGCGCAGATGGTCGCCTTGCTGCGCGATCTGCAGCGCAAGCTCGACCTC
ACCTACATGTTCATCTCGCACGATCTGCGCGTCGTCGCCTCGCTCGCCAGCCACCTGATCGTGATGCGTCACGGCAAGGT
GGTGGAGGAGGGCGCCGCCGCGCAGCTGTTCAAGGCGCCGAAGACCGACTACACCCGCGCGCTGTTTGCGGCAGCGTTCA
GGAATGAGACGGCGGGGAATGGGACGGCGGCGCCATAA

Protein sequence :
MDAISQPLLSVRDLSVAFHQGGRVSTAVDRVSFDIKRGECIALVGESGSGKSVSALSVLKLLPYPVASHPSGSIRFKGRD
LLPLSEGEMRELRGSDISIIFQEPMTSLNPLHTIERQISEILQLHQPISNSAARTRVLELLTQVGIPEPETRLGSYPHQL
SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSLLFITHDLGIVRRIADRVCVMNGGKIVE
QGPVEQVFTAPSHPYTKALLAAEPKPDPAPPRPDQPVVMQAQDLKVWFPIKRGLFRSTVGHIKAVDGVSIAVRKGETLGV
VGESGSGKTTLGLALLRLISSDGPIVFLGSEIQGLSFKQVRPFRRDMQIVFQDPFGSLSPRMSVGDIIAEGLSVHQPGLS
EEEAEAKVVKALTEVGLDPATRFRYPHEFSGGQRQRISVARAVVLEPSFVVLDEPTSALDMLFQAQMVALLRDLQRKLDL
TYMFISHDLRVVASLASHLIVMRHGKVVEEGAAAQLFKAPKTDYTRALFAAAFRNETAGNGTAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-84 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-72 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 42