Gene Information

Name : S58_65630 (S58_65630)
Accession : YP_007516117.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7425350 - 7427989 bp
Length : 2640 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCGACAAATATACCGAGCGCGCGCGGGGCTTCATTCAATCGGCGCAGTCGCTGGCCGTGCGCGACGGCCATCA
GCAGTTCTCGCCGCTGCATCTTCTGAAAGTCCTGCTCGACGACGGCGAGGGACTGGCGGGCGGTCTGATTGATCGCGCCG
GCGGCAATTCGCGCGCGATCCTCAAGGCCACCGAAGACGCGCTCGGCAAGATGCCGAAAGTGTCGGGCAGCGGCGCCGGA
CAGGTCTATCTGTCGCCCGAGCTGGCGCGCGCCTTCGATGCTGCGGAAAAGGCGGCCGAGAAGGCCGGCGACAGTTTCGT
CACCGTCGAGCGGCTGCTGCTCGGGCTGACGCTGGAGAAGAATAGCGAGGCCGGCAGCATTCTCGCCAAGGGTGGCGTCA
CCGCGCAGAACCTCAACGCGGCGATCGAATCCTTGCGCAAGGGCCGCACGGCCGACTCGGCGACCGCCGAAAACGCTTAT
GATGCGCTCAAGAAATATGCCCGCGACCTGACCCAGGCAGCGCGCGACGGCAAGCTCGATCCGGTGATCGGCCGCGACGA
GGAGATCCGCCGCACCATCCAGGTGCTGTCGCGGCGGACCAAGAACAATCCCGTGCTCATCGGCGAGCCCGGCGTCGGCA
AGACCGCGATCGTCGAGGGCCTCGCGTTGCGCATCGTCAATGGCGACGTGCCGGAGAGCCTGAAGGACAAGCGGCTGCTG
TCGCTCGATCTCGGCGCGTTGATCGCCGGTGCGAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTGCAGGA
GGTCACCGGGGCAGAGGGCGCGTTCGTGCTGTTCATTGACGAGATGCACACGCTGATCGGCGCCGGCAAGGCCGATGGCG
CCATGGACGCGTCCAACCTGTTGAAGCCTGCGCTGGCGCGCGGCGAGCTGCATTGCATCGGCGCGACCACGCTCGACGAG
TATCAGAAGCACGTCGAGAAGGACGCGGCCTTGGCGCGGCGGTTCCAGCCGGTCTACGTCACCGAGCCGACGGTCGAGGA
CACCATCTCGATCCTGCGCGGCCTGAAGGACAAATACGAGCAGCATCACGGCGTGCGCATCACCGACTCCGCGCTGGTGG
CCTCTGCGACGCTGTCGAACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCGGCG
GCGCGGCTGAAGATGCAGGTCGACTCCAAGCCGGAAGAGCTGGATTCGATGGATCGCGAGATCATCCGGCTCAAGATCGA
GCAGGAGGCGCTCAAGAAGGAAAGCGACCTCGGCTCCAAGACCCGCCTGCAGGCGCTGGAGAAGGAGCTCGCCGATCTCG
AGGAGAAATCGGCGGCGCTGACGGCGAAGTGGAGCGCCGAGAAGGATAAGCTGTCCAACGCGCAGAAGCTCAAGAGCGAG
CTGGATGCCCTGCGCATCGAGCTCGCCAACGCGCAGCGCCGCGGCGAGTACCAGAAAGCGGGCGAGCTGGCCTATGGCCG
CATTCCCGATCTGGAGAAGCGGCTCGCCGATATCGAGGCCAAGGAGAATGCCGGCGAGATGATGGAGGAGGCGGTCACCG
CCAACCACATCGCGCAGGTGGTCTCGCGCTGGACCGGCGTGCCGGTCGACAAGATGCTCGAGGGCGAGAAGGACAAGCTG
CTGCGGATGGAGGACTCGCTCGGCAAGCGCGTCGTCGGCCAGTTCGAGGCCGTGCATGCGGTCGCGACCGCCGTGCGACG
CTCGCGCGCCGGCCTGCAGGACCCGCACCGGCCGATGGGCTCGTTCATGTTCTTAGGCCCGACCGGCGTCGGCAAGACCG
AGCTGACCAAGGCGCTCGCCGAGTACCTGTTCAACGACGAGACCGCGATGGTTCGGCTCGACATGTCCGAGTACATGGAG
AAGCATTCGGTGTCGCGGCTGATCGGCGCGCCTCCCGGCTATGTCGGCTACGACGAGGGCGGTGCGCTGACCGAGGCCGT
GCGGCGCAGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTCAACGTGCTGTTGCAGG
TGCTCGATGATGGCCGCCTGACCGATGGTCAGGGCCGCACCGTCGACTTCCGCAACACGCTGATCATCATGACGTCGAAT
CTCGGCTCCGACTTCCTGGTCAATCAGCCGGAAGGCGAGGATACGTCGGAGGTGCGCGAACTGGTGATGGGCACGGTGCG
GAGTCATTTCCGCCCCGAGTTTCTCAACCGCGTCGACGAGATCATCCTGTTCCATCGGCTGCAGAAGAGTGAGATGGGCC
GGATCGTCGAGATCCAGTTCGCGCGGCTCTCGAAACTCCTGGAGGAGCGCAAGATCACGCTGTCGCTCGATGCCGACGCG
CGCGACTGGCTCGCCGCCAAGGGCTGGGATCCGGCCTATGGCGCAAGGCCGCTGAAGCGGGTGATCCAGCGCAGCGTGCA
GGATCCGCTGGCGGAGATGATCCTCGCCGGCGACATCAAGGACGGCGACAAGGTCGCGATATCGACGGAAGGCAACGTGC
TGACCTTCAACGGCAAGGCGCATCGCACCGCTGAGATCGCGCCGTTCGAGGCGCCGATCCCCAAGCGCAAGCTGAACTGA

Protein sequence :
MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGNSRAILKATEDALGKMPKVSGSGAG
QVYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTLEKNSEAGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAY
DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKRLL
SLDLGALIAGAKYRGEFEERLKAVLQEVTGAEGAFVLFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDE
YQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAA
ARLKMQVDSKPEELDSMDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSAALTAKWSAEKDKLSNAQKLKSE
LDALRIELANAQRRGEYQKAGELAYGRIPDLEKRLADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKL
LRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPHRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYME
KHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN
LGSDFLVNQPEGEDTSEVRELVMGTVRSHFRPEFLNRVDEIILFHRLQKSEMGRIVEIQFARLSKLLEERKITLSLDADA
RDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMILAGDIKDGDKVAISTEGNVLTFNGKAHRTAEIAPFEAPIPKRKLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-104 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_65630 YP_007516117.1 chaperone VFG2076 Protein 2e-116 43
S58_65630 YP_007516117.1 chaperone VFG2084 Protein 1e-110 43