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Name : S58_65140 (S58_65140) Accession : YP_007516074.1 Strain : Bradyrhizobium oligotrophicum S58 Genome accession: NC_020453 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 7358869 - 7360524 bp Length : 1656 bp Strand : - Note : - DNA sequence : ATGAGCGGTACACTGTCGACGCAATTCCACGCCTATCTTCGCGAGCGCCATCCTCAGGCGACGGGCGAGGGCGGAGCTGC GGGCGAAACGCAGATTGCGCTCTGGGACCGGTTTGGCCTGACTGCCGAAGTCTTTGCGGCGGAGGTCGCCGGCTTTACCG GACTGGAACGCGTATCGCTGCGTGAGCTGATGGCGGCGTCACCCGCAGTAAGTGAGTTTTCGGATCGCTTCCTGCGCGAA GTGCTCGGCTACCCGCATAAGAATTCCACAGGCGCGGCCGTGTTTGCGATGGCCGATCCGACCGACCAGGCGGTGCGGCG GGCCGCCGAGCTGGTGCTCGGCCCGAACACGCTGTTTCAGGTCGCCTCTCATGAAGATATCGCCGTTGTGCTCGAGCAGA GGCTTGGCGGCGGCGAAGAAGCCGAGATGTCGCCGGCCCAGGAGCTGCGCGACGACGACATCGAAAGTCTCCGCGATCTG GCGAGTGGCGCGCCGGTCGTCCGCGCGGTGAACGACTTGATCGAGAAGGCGGTGGAGATGCGCGCCAGCGACATCCACAT CGAGCCGTTCTCGACCGGGCTGGTGGTCAGGTTGCGCGTCGACGGCCTGTTGCGTCCGATTGCGGCGCCTGCCGGCGTGC TGCCGCAGGCGGTCATCTCGCGCATCAAGATCGTCGCCGGCCTGAACATTGCCGAGCGGCGCCTGCCGCAGGACGGTGCG GCCCGCATTCGCGTCGGCCGCGCCGAGATCGATGTCCGCGTCGCGATCATGCCGACCCAGCATGGTGAGTCTGCGGTGCT GCGTATCCTGCCGAAGGATCGCTCGCAGCTCGTCGCGAGTCGTCTCGGCCTTTCCGGGCGCGACGACGCGGCACTGCGCC GCCTGATCACCTTGCCGCACGGCATGATCGTGATCACGGGGCCGACCGGCAGCGGCAAGACCACGACCCTGGCGACGATC CTGTCGATGCTGAACACGCCGGAGCGCAAGATCCTCACCGTTGAGGATCCCGTGGAATATGAGATCCCCGGCATCAACCA GTCACAGATCAAGCCAGCGATCGGACTGACATTCGCAAGCGCGCTGCGTTCCTTCGTGCGTCAGGACCCCGACGTCATCA TGGTTGGCGAGATCCGAGACAGCGAGACGGCGCATGTCGCCGTCCATGCCGCGCTGACCGGCCATCTCGTGCTGACGACG CTGCACACTGAAACCGCGGCGGCCGCTGTGCCGCGGCTTCTGGACCTCGGCGTCGAAGGCTATTTGCTGCGGTCGACGCT CCGCGCGGTCATTGCCCAACGGCTGGTGCGCCAGCTCTGCGAGCATTGCAAGACGCCGAAGCCGCTTGACGAGGAGACGT GTCGCGATGATCCGCGCTTCGGTCATCTCGGCCTCGTCCCCGGCGACGTCACGTGGCACCCGACAGGCTGCGAGCGATGC GGCCAGAGCGGCCATCGCGGCCGGGTCGGTGTGTTCGAGCTGCTCGAGCTGACGAGCAATCTACGCGAGCTGATCGCTGA CAGTGCCGACGGCCTCGCGATCGATCGCCTGGCGATCCAGGAGGGCATGACGACCATGCTCGACGACGGTGTCGTCAAGT GCCGCGCGGGTGTCACTTCGGCATCCGAACTGCTTCGTGTCCTGGTCGCGCGCTGA Protein sequence : MSGTLSTQFHAYLRERHPQATGEGGAAGETQIALWDRFGLTAEVFAAEVAGFTGLERVSLRELMAASPAVSEFSDRFLRE VLGYPHKNSTGAAVFAMADPTDQAVRRAAELVLGPNTLFQVASHEDIAVVLEQRLGGGEEAEMSPAQELRDDDIESLRDL ASGAPVVRAVNDLIEKAVEMRASDIHIEPFSTGLVVRLRVDGLLRPIAAPAGVLPQAVISRIKIVAGLNIAERRLPQDGA ARIRVGRAEIDVRVAIMPTQHGESAVLRILPKDRSQLVASRLGLSGRDDAALRRLITLPHGMIVITGPTGSGKTTTLATI LSMLNTPERKILTVEDPVEYEIPGINQSQIKPAIGLTFASALRSFVRQDPDVIMVGEIRDSETAHVAVHAALTGHLVLTT LHTETAAAAVPRLLDLGVEGYLLRSTLRAVIAQRLVRQLCEHCKTPKPLDEETCRDDPRFGHLGLVPGDVTWHPTGCERC GQSGHRGRVGVFELLELTSNLRELIADSADGLAIDRLAIQEGMTTMLDDGVVKCRAGVTSASELLRVLVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-67 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-67 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S58_65140 | YP_007516074.1 | general secretion pathway protein E | VFG2426 | Protein | 5e-60 | 48 |
| S58_65140 | YP_007516074.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-68 | 47 |
| S58_65140 | YP_007516074.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-67 | 47 |
| S58_65140 | YP_007516074.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-70 | 46 |
| S58_65140 | YP_007516074.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-67 | 45 |
