Gene Information

Name : S58_60040 (S58_60040)
Accession : YP_007515567.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6795177 - 6795686 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence : 
ATGGAGGCGATGATGCTGGGGTGGGCGGGGATCAGGGACGTCGTGACGTATCGTGTCGCGAGGTGGCGCGGGCGGCGACG
ACTGCGCCGCGGCAGCCAAGGTGAGGCGGGGTTCACCCTGGTCGAAATGCTGGTCGTCATCACCATCATCGGCCTCATCA
TGGGATTGGTCGGACCGCGCGTGCTGAGCTATCTCTCCGACTCCAAGCTCAAGACGGCGCGGATCCAGATCCGCAGCCTG
TCGTCGGCGCTCGACCTCTATCATCTCGATAATGGCCGCTATCCGACTGCAGCCGAGGGACTCGGCGCACTGGTCCAGAA
GCCTGCCGCGGCAGTTAGCTGGAACGGCCCCTATCTGAGCGGCACCTTGGTTCCGAACGATCCGTGGGGGCGACCCTATG
TCTACAAATTCCCGGGGCAGCATGGCGCTTATGACATCGTCTCGCTCGGGCCCGAGGGGCGTGAGGACGAGGCCTCTGCC
AACGCCAATGTGACGAGCTGGCAGCCGTGA

Protein sequence : 
MEAMMLGWAGIRDVVTYRVARWRGRRRLRRGSQGEAGFTLVEMLVVITIIGLIMGLVGPRVLSYLSDSKLKTARIQIRSL
SSALDLYHLDNGRYPTAAEGLGALVQKPAAAVSWNGPYLSGTLVPNDPWGRPYVYKFPGQHGAYDIVSLGPEGREDEASA
NANVTSWQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-23 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_60040 YP_007515567.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 5e-25 41
S58_60040 YP_007515567.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 6e-24 41