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Name : S58_42100 (S58_42100) Accession : YP_007513783.1 Strain : Bradyrhizobium oligotrophicum S58 Genome accession: NC_020453 Putative virulence/resistance : Resistance Product : tetracycline-efflux transporter Function : - COG functional category : - COG ID : - EC number : - Position : 4787134 - 4788411 bp Length : 1278 bp Strand : - Note : - DNA sequence : ATGGCCCTGATGGTCGACACCGAGCTCACGAGTTCCGACGGCGTGCCGTCGCCGCAGGCGCCACGCCGCGGCGTCGTCGC GTTCATCTTCGTCACCATCCTGCTCGACATGCTGGCGCTCGGGCTGATCATGCCGATCCTGCCCAAGCTGATCGAAAGCT TCGTCGCCAATGACACGGCGCAGGCGGCGCGCATCTTCGGCCTGTTCGGCACCGCCTGGGCGCTGATGCAGTTCGTGTTC TCGCCGGTGCTCGGCAGCCTGTCGGACCGGTTCGGTCGGCGCCCCGTGATCCTGCTGTCGAACTTCGGCCTCGCCGCCGA CTACGTGCTGATGGCGCTGGCGCCGTCGCTCGCCTGGCTGTTCGTCGGCCGGCTGATCTCCGGCGTCACCTCGGCGAGCA TCTCGACTGCCTTCGCCTACATCTCCGACCTCACGCCGCCGGACCGCCGCGCCGCGGTCTTCGGCCGCATCGGTGCGGCG TTCGGCGCCGGCTTCGTGCTCGGCCCCGCCACCGGCGGCCTGCTCGGCGACATCGATCCCCGGCTGCCGTTCTGGGCGGC CGCAGGGCTCAGCTTCGCCAATGCACTGTACGGACTGTTGGTGCTGCCGGAATCATTGCCGGCCGAACGGCGCAGCCCGT TCCGCTGGCGCACCGCCAATCCGCTTGGCGCGCTGCAATTGCTGCGCTCCGATCGCATGCTCGCCGGCCTGTCGGTCGTC AACTTCATCACCCAGCTCGCCCATGTCGTGCTGCCGTCGACCTTCGTGCTCTATGCGACCTATCGCTACGGCTGGGATAC GCGCACGGTCGGCCTGACGCTGGCGATCGTCGGTGTCTGCGCCATGATCGTGCAGGGCGGGGCAGTCGGACTGATCGTGC GCTCGCTGGGCGAACGCGGGGCGCTGATGCTCGGGCTGTGCTCGGGGACGATCGGATTTCTGATCTTCGGCCTGGCGCCG ACGGGGACGTTGAGCTGGCTCGGCATTCCCGCGATGGCGCTGTGGGGCGTGTCGGGGGCGGCGATCCAGGCGCTGATGAC GCGGCTGGTGCCGTCGGACCGGCAGGGCCAGCTGCAGGGCGCAACGTCGAGCGTGCAGAGCATGGCCCAGCTCGCAGGCC CGTTCCTGTTCACGCTGACCTTCGCCTATTTCATCGGTGCCGCCGCGCCGGTGCATCTGCCCGGCGCGCCATTTCTGCTG GCAACCGCGCTGCTGATCATAGCGATCGGGATTGCCATGCAGACGCTGCGCGCGGGCAAAGAAAAACCCTCAGCCTGA Protein sequence : MALMVDTELTSSDGVPSPQAPRRGVVAFIFVTILLDMLALGLIMPILPKLIESFVANDTAQAARIFGLFGTAWALMQFVF SPVLGSLSDRFGRRPVILLSNFGLAADYVLMALAPSLAWLFVGRLISGVTSASISTAFAYISDLTPPDRRAAVFGRIGAA FGAGFVLGPATGGLLGDIDPRLPFWAAAGLSFANALYGLLVLPESLPAERRSPFRWRTANPLGALQLLRSDRMLAGLSVV NFITQLAHVVLPSTFVLYATYRYGWDTRTVGLTLAIVGVCAMIVQGGAVGLIVRSLGERGALMLGLCSGTIGFLIFGLAP TGTLSWLGIPAMALWGVSGAAIQALMTRLVPSDRQGQLQGATSSVQSMAQLAGPFLFTLTFAYFIGAAAPVHLPGAPFLL ATALLIIAIGIAMQTLRAGKEKPSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-42 | 43 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-42 | 43 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 6e-42 | 43 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-42 | 43 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-42 | 42 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 3e-42 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | NC_011586.7045189.p0 | Protein | 7e-39 | 43 |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | AY264780.2.gene3.p01 | Protein | 3e-44 | 42 |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | X75761.gene.p01 | Protein | 2e-41 | 42 |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | CP001485.1.gene2821. | Protein | 2e-42 | 42 |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | AF534183.gene.p01 | Protein | 2e-42 | 42 |
| S58_42100 | YP_007513783.1 | tetracycline-efflux transporter | NC_010410.6002597.p0 | Protein | 2e-42 | 42 |
