Gene Information

Name : S58_39930 (S58_39930)
Accession : YP_007513566.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Unknown
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4550748 - 4552370 bp
Length : 1623 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCGACAGATCCCATTCTCGACGTCGACCGCCTGAGCGTTCGCCTGCCCAAGGGCGCCGACCGCACCCACGCGAT
TTCCGAGGTCTCGCTGTCGATCGCCGAAAACGAGATCGTCTGCATCGTCGGCGAATCCGGCTCCGGCAAGTCGATGATGG
CCAATGCCATCATGCGGCTGCTGCCGGAGGGCGTGACCACCGACGGCGGGCGCATCCTGTTCTGCGGCCGCGATCTCTGC
ACCGCCTCGGCCGCCGAGATGCGCAGCATTCGCGGCGCCGACATCGCGATGGTGTTCCAGGAGCCGATGACCGCGCTCAA
TCCGCTGCGCACGATCGGCGATCAGATCGGCGAGGTGCTGGACATTCACACTGATCTTGGCAACGCCGAGATCAGGTCGC
GGGTGCTGTCGCTGTTGGCCGACGTCCACATCCCCGATCCTCCACGGGCCGCAAAAGCCTATCCGCACGAATTGTCCGGC
GGCCAGCGCCAGCGCGCGATGATCGCCATGGCCTTGGCGCTCGATCCAAAGCTCCTGATCGCGGACGAGCCGACCACCGC
GCTCGACGTGACGACGCAGGCGCAGATTCTCAAGCTGATCCGCGAATTGCAGCAGCGGCGCAGGACCGCGGTGCTCTTCA
TCACCCATGATTTCGGCGTCGTCGCGGAGATCGCCGACCGCGTCGTCGTGATGCAGCATGGCGTCATCGTCGAGCACGGC
CCCGCGATCGACGTGCTGCGCAAGCCGCAGCACGCCTACACGCAGCAGCTGATCGCCGCGGTGCCGCCCGTCGCTGCGCC
GCCGCCGCGCAAGCTGTCGGAGCAGGCGATTCTTGAGTTGTCCGGTCTCGTCAAAACCTATCGGACAGGTGGTTTCCTCG
GCCGCGGCGAGCGCGTGACACACGCCGTCAAGGACGTCTCGCTCACGCTGCCGAAGGGCGCGACGCTCGGTATCGTCGGC
GAGTCCGGCTCCGGCAAATCCACCCTCGCCCGCTGCATCATTCGCCTGATCGATCCGGACGCCGGATCGGTTCTGCTGGA
CGGCGAGGACTGGGCCCGCTTGTCGCGCCGCGCGATCCGGGAGCGAACGCAGCGGATGCAGATGGTGTTCCAGGATCCGT
ATGCCTCGCTGAACCCGCGTCGCAAGGCGGTCGAGCTCGTGGCCCAGGGGCCGATCGTGCATGGCACGCCCCGCGACCAG
GCGCTGACGGAGGCGCGCGACCTGTTCAGCCTGGTGGGTCTCGACCCCTCCGCTGCCGATCGCTTCCCGCACGAATTCTC
CGGCGGCCAGCGCCAGCGCATCGGCCTGGCGCGCGCCCTCGCGCTGAAGCCTGCCGTGCTGGTCGCGGACGAGCCGGTAT
CCGCACTCGACGTCTCGGTGCAGGCGCAGGTCTTGAGGCTGCTCACCGGCCTACGCGAGCGGCTGGGCCTGTCGATCATC
TTCATCACGCACGACCTGAGGGTCGCGGCGCAGATCTGCGATCTGGTTGCGGTCATGAAGGACGGCGTCGTCGTCGAGCA
CGGTCTCACGCATGACGTGTTCGGCAGCCCAGAGCATCCCTACACGCAGGCCCTGCTCGAAGCCATCCCGGGCGGCGATT
TCGCCCGGACGGCGCATGCTTGA

Protein sequence :
MSSTDPILDVDRLSVRLPKGADRTHAISEVSLSIAENEIVCIVGESGSGKSMMANAIMRLLPEGVTTDGGRILFCGRDLC
TASAAEMRSIRGADIAMVFQEPMTALNPLRTIGDQIGEVLDIHTDLGNAEIRSRVLSLLADVHIPDPPRAAKAYPHELSG
GQRQRAMIAMALALDPKLLIADEPTTALDVTTQAQILKLIRELQQRRRTAVLFITHDFGVVAEIADRVVVMQHGVIVEHG
PAIDVLRKPQHAYTQQLIAAVPPVAAPPPRKLSEQAILELSGLVKTYRTGGFLGRGERVTHAVKDVSLTLPKGATLGIVG
ESGSGKSTLARCIIRLIDPDAGSVLLDGEDWARLSRRAIRERTQRMQMVFQDPYASLNPRRKAVELVAQGPIVHGTPRDQ
ALTEARDLFSLVGLDPSAADRFPHEFSGGQRQRIGLARALALKPAVLVADEPVSALDVSVQAQVLRLLTGLRERLGLSII
FITHDLRVAAQICDLVAVMKDGVVVEHGLTHDVFGSPEHPYTQALLEAIPGGDFARTAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-75 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-94 43