Gene Information

Name : S58_25320 (S58_25320)
Accession : YP_007512125.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : putative UDP-glucose/GDP-mannose dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2858732 - 2859991 bp
Length : 1260 bp
Strand : +
Note : -

DNA sequence :
GTGATAGGCCTTGGCTATGTCGGCCTGCCGGTCGCGGCTGCGTTCGCGCGGACAGGCTGCCCGGCGATCGGGTTCGACAT
CGATGCGGCCCGGGTCGCGGAGCTGAAGGACGCAAGGGACCGGACCTGCGAGGTCGATGCAGCCGATCTGCGCCGGCCGG
GCCTGCGCTTCACCAGCGAGCCGGACGACATCGCGACTGCCGATTTTTTCATCGTCACCGTTCCGACCCCGATCGACAGC
GCACGGCGGCCCGATCTCGGCGCCATGCTGGCCGCCACGCGCACGGTGGGAGCCGTTCTGAAGCGCGGCGACATCGTCGT
CTATGAGTCGACCGTCTATCCGGGCGCCGTCGAGGAAGACTGCGTCCCGTTGCTGGAGAGCAGCTCGGGCTTGAAGGCGG
GGGCCGATTTCAACGTCGGCTATTCGCCGGAGCGCATCAATCCCGGCGACAAGACCCATCGCTTCGAGACCATCACCAAG
GTGGTCTCGGCACAGAATCCGCAGACGCTCGCGATCGTCGCCGCCGTCTACGGCTCGGTGGTCACCGCCGGGATCCATCG
CGCGCCTTCGATCAAGGTGGCCGAGGCCGCCAAGGTGATCGAGAACACCCAGCGCGATCTCAACATCGCCTTCATGAACG
AGCTGTCGCTGATCTTCCAGGCGCTCGAGATCGACACCGGAGACGTGCTCGCAGCCGCCGCGACCAAGTGGAACTTCCTG
CCGTTCACCCCCGGCCTCGTCGGCGGCCACTGCATCGGCGTCGATCCTTATTACCTCACCTATCGCGCGGAGAAGGCGGG
CTACCATCCCGAGGTGATCCTTGCAGGCCGTCGCATCAACGACGAGATGGGCCGGCGCATCGCGCGCGAATGCATCCGCG
GATTGCTGCGACGAAAGGGCCGGGGTGGCCTCGTCACCATCCTGGGCATGACGTTCAAGGAGAACGTGCCGGACATCCGC
AATTCGCGCGTGATCGACATCATCGGTGAATTGCAGTCCTTCGGCGTCGAGGTGCAGATCGCCGATCCGCTGGCCGATGC
AGCGGCGGTGCACGAGGAGTACGGCATCGGCCTGACGGCGATCGAGGCGCTGCGTCCGGCCGACGCCGTCGTATTGGCCG
TGTCGCACGATCAGTATCTCGCCGGAGGCTGGCCTCTTGTGCAGGGTCTGCTGCGCGAGGAGAGCGGCCTCGTGCTCGAC
GTGAAGATGAAGCTCGACCGCGCGAGCAAACCCACCGCCATCGAACTGTGGCGACCCTGA

Protein sequence :
MIGLGYVGLPVAAAFARTGCPAIGFDIDAARVAELKDARDRTCEVDAADLRRPGLRFTSEPDDIATADFFIVTVPTPIDS
ARRPDLGAMLAATRTVGAVLKRGDIVVYESTVYPGAVEEDCVPLLESSSGLKAGADFNVGYSPERINPGDKTHRFETITK
VVSAQNPQTLAIVAAVYGSVVTAGIHRAPSIKVAEAAKVIENTQRDLNIAFMNELSLIFQALEIDTGDVLAAAATKWNFL
PFTPGLVGGHCIGVDPYYLTYRAEKAGYHPEVILAGRRINDEMGRRIARECIRGLLRRKGRGGLVTILGMTFKENVPDIR
NSRVIDIIGELQSFGVEVQIADPLADAAAVHEEYGIGLTAIEALRPADAVVLAVSHDQYLAGGWPLVQGLLREESGLVLD
VKMKLDRASKPTAIELWRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-108 55
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-93 51
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-93 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_25320 YP_007512125.1 putative UDP-glucose/GDP-mannose dehydrogenase family protein VFG0431 Protein 2e-93 51