Gene Information

Name : thiC (S58_19020)
Accession : YP_007511496.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2178335 - 2180236 bp
Length : 1902 bp
Strand : -
Note : -

DNA sequence :
ATGAACATCCGCTCCAATCCCGACACCACCCTGCCCGCCGTCACCACCGGCCCGCTGCCGTCCTCGCGCAAGATCCACGC
GACCCCGGACTCGGCGCCCGACCTGCGCGTGCCGCTGCGCGAAATCATCCTCTCCGAAGGCGCCGGCGAGCCCAATTTGC
CGGTCTACGACACCTCCGGCCCCTACACCGATCCGACCGTGACGATCGACGTCAACGCCGGCCTGTCGCGCGCCCGCACC
GCCTGGGTGCGCGAGCGCGGCGGCGTCGAGGAGTATGTCGGCCGCGACATCAAGCCCGAGGACAATGGCAATGTCGGCGC
CGACAAGGCCGCAAAGGCCTTCACCGCGCATCACAAGCCGCTGCGCGGGCTCGACGGCCACAAGATCACCCAGCTCGAAT
TCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAATCTCGGCCGCAAGACCCAGCTCGAG
CGCGCCGAAGCCGCGCTCGCCGACGGCGAAAGCTTCGGCGCGGAAGTCCCCGCCTTCATCACGCCTGAGTTCGTGCGCTC
GGAGATCGCGCGCGGCCGCGCCATCATCCCCTGCAACATCAACCACGCCGAGTTGGAGCCGATGATCATCGGCCGCAACT
TCCTCACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCTTCAGTTGAAGAGGAAGTCGACAAGATGGTGTGG
GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCGACAGGCCGCAACATCCACACCACGCGGGAATGGATCCTGCG
TAATTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGAAGTGCAACGGCGACCCGGTCCAGCTGACCT
GGGAGCTCTACAAGGACACCCTGATCGAGCAGTGCGAGCAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCGGCTC
GCCTACATCCACCTCACCGCCAGCCGCGTCACCGGCATCGTCAGCCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTCGC
GCATCACAAGGAGAGCTTCCTCTATACGCACTTCGAGGAGATCTGCGACATCATGCGCAAGTATGACGTCTCGTTCTCAT
TGGGCGACGGCCTGCGCCCCGGCTCGATCGCCGATGCCAACGACCGCGCGCAATTTGCTGAGCTGGAAACTCTTGGCGAG
CTGACCAAGATCGCGTGGGACAAGGGCTGCCAGGTCATGATCGAGGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT
CAACATGGACAAGCAGCTCAAGGAGTGCGGCGAGGCGCCGTTCTACACCTTGGGGCCGCTGACCACCGACATCGCGCCGG
GCTACGACCACATCACCTCCGGCATCGGTGCGGCCATGATCGGCTGGTTCGGCTGCGCCATGCTGTGCTACGTGACACCG
AAGGAGCATCTGGGTCTCCCTGACCGTAACGACGTCAAGGTGGGTGTCATCACCTACAAGATCGCGGCCCACGCCTCCGA
TCTCGCCAAGGGTCATCCCGCCGCGCAGCTGCGCGACGACGCACTGTCCCGCGCCCGCTTCGACTTCCGCTGGACCGACC
AGTTCAATCTCGGCCTCGACCCGGAAACCGCAAAACACTTCCACGACGAGACCCTGCCGAAGGAAGCCCACAAGGTCGCG
CATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACCCAGGACGTCCGCGACTACGCCGCCACGCTCAA
CGATCCGGCGACGGTCGGCATGACCATCAGCGGCACCATCGAGGACGGCATGGCCCAGATGAGCGCCAAGTTCAAGGAAA
TGGGCGGCAGCGTGTATCTGGATGCGGAGAAGGTGAAGGAGAGCAACAAGGCGTTGTCCTGA

Protein sequence :
MNIRSNPDTTLPAVTTGPLPSSRKIHATPDSAPDLRVPLREIILSEGAGEPNLPVYDTSGPYTDPTVTIDVNAGLSRART
AWVRERGGVEEYVGRDIKPEDNGNVGADKAAKAFTAHHKPLRGLDGHKITQLEFARAGIITKEMIYVAERENLGRKTQLE
RAEAALADGESFGAEVPAFITPEFVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCNGDPVQLTWELYKDTLIEQCEQGVDYFTIHAGVRL
AYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEEICDIMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE
LTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWTDQFNLGLDPETAKHFHDETLPKEAHKVA
HFCSMCGPKFCSMKITQDVRDYAATLNDPATVGMTISGTIEDGMAQMSAKFKEMGGSVYLDAEKVKESNKALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 65
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 65
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 64