Gene Information

Name : S58_13020 (S58_13020)
Accession : YP_007510899.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : putative response regulator in two-component regulatory system, sigma 54-dependent
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1486492 - 1487985 bp
Length : 1494 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTGCCAGCATTTTGATTGCCGATGATGATCCGGTCCAGCGCCGGCTGGTGGAGAACATGGTTCAGAAATGCGGCTA
CGAGGCGGTCGTCGTCGAGACCGGCGATGCCGTCATCGAAAAGCTGACCCATCCCGACGCCGGCCCCATCGACGCCATCG
TGCTCGATCTCGTGATGCCTGGCCTCGACGGCATGGGCGTCCTGTCCAAGATGCGCGAGATGGGCATCTCGATCCCCGTG
ATCGTACAGACCGCGCATGGCGGCATCGACAATGTGGTCTCGGCGATGCGCGCCGGCGCCCAGGATTTCGTCGTCAAGCC
GGTCGGCATCGAGCGGCTGCAGGTCTCCTTGCGCAATGCGCTCAATACCTCGGCCTTGAAGGGCGAATTGCAGCGCATCC
GGCACAGCCGCGAAGGGCGGCTGACCTTCGCCGACATCATCACGCGCGCGGAGGCCATGGCACCGATCCTGCGCATCGCG
GAAAAGGCGGCGGCCTCGTCGATCCCCGTCCTGATCGAGGGCGAATCAGGCGTCGGCAAGGAGCTGTTCGCCCGCGCCAT
CCATGGCACCAGCGAGCGCAAGATGAAGCCGTTCGTCGCGGTCAATTGCGGCGCGATTCCGGACAATCTGGTGGAATCGA
TCCTGTTCGGTCACGAGAAGGGCGCATTCACTGGCGCGACCGAGCGCCACACCGGCAAGTTCGTCGAAGCGCATGGCGGC
ACGCTGTTCCTCGACGAGGTCTCCGAGCTGCCGCTCACGGCCCAGGTCAAGCTGTTGCGTGCGCTGCAGGAAGGTGCGGT
CGAGGCGGTCGGAGGCCGCAAGCCGGTGAAGGTCGACGTTCGCATCATCTCGGCGACCAATCGCCGCCTGCTCGATCGCG
TCAAGGAAGGTCACTTTCGCGAGGACCTGTTCTACCGGCTGCACGTGCTGCCGCTGACCATTCCGCCGTTGCGGGCGCGC
CGCGAGGATATCCCGCATCTGCTGCGCCATTTTCTCGCGCGCTTCGCAGCCGAGGAGAACCGGACTGTTTCGGGCATCGC
CGGCGAGGCCGTCGCCTATCTGACCAGGCTCGACTGGCCCGGCAACATCCGCCAGCTCGAAAATGCGGTCTATCGCGCGG
TTGTCATGAGCGAGAGCGACCAGCTCGGCGTCGCGGACTTTCCGCTGATCCCGACTCACGTGGCGCCGGTCGAGCCCGCG
CCTGCGCTGATGGTGGAGCGCCCCATCGACCTTGCGCTGCCCTCCCTGGTGCCGGGTAGCGAAGTACCCATCGCCCCCCT
GACCTCGCATGGCAGCCTGCCGATGCTGACCGCGGGCGGGGACGTGCGTCCGCTGGAGGAGATGGAGCATGAGATCATCC
GCTTCGCCATCGCCCATTACCGCGGCCAGATGTCGGAGGTGGCGCGCCGTCTCAAAATCGGACGCTCGACGCTCTATCGC
AAGCTCGACGAAGCCAATGGTGAGACCCAGTCGACGGAGTCGCCGCCGCTGTGA

Protein sequence : 
MAASILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKLTHPDAGPIDAIVLDLVMPGLDGMGVLSKMREMGISIPV
IVQTAHGGIDNVVSAMRAGAQDFVVKPVGIERLQVSLRNALNTSALKGELQRIRHSREGRLTFADIITRAEAMAPILRIA
EKAAASSIPVLIEGESGVGKELFARAIHGTSERKMKPFVAVNCGAIPDNLVESILFGHEKGAFTGATERHTGKFVEAHGG
TLFLDEVSELPLTAQVKLLRALQEGAVEAVGGRKPVKVDVRIISATNRRLLDRVKEGHFREDLFYRLHVLPLTIPPLRAR
REDIPHLLRHFLARFAAEENRTVSGIAGEAVAYLTRLDWPGNIRQLENAVYRAVVMSESDQLGVADFPLIPTHVAPVEPA
PALMVERPIDLALPSLVPGSEVPIAPLTSHGSLPMLTAGGDVRPLEEMEHEIIRFAIAHYRGQMSEVARRLKIGRSTLYR
KLDEANGETQSTESPPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-56 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-56 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_13020 YP_007510899.1 putative response regulator in two-component regulatory system, sigma 54-dependent BAC0089 Protein 4e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_13020 YP_007510899.1 putative response regulator in two-component regulatory system, sigma 54-dependent VFG1248 Protein 2e-54 43
S58_13020 YP_007510899.1 putative response regulator in two-component regulatory system, sigma 54-dependent VFG1214 Protein 1e-60 42
S58_13020 YP_007510899.1 putative response regulator in two-component regulatory system, sigma 54-dependent VFG1249 Protein 3e-63 41