|
Name : hsdM (lilo_0829) Accession : YP_007508156.1 Strain : Lactococcus lactis IO-1 Genome accession: NC_020450 Putative virulence/resistance : Unknown Product : type I restriction enzyme M protein Function : - COG functional category : - COG ID : - EC number : - Position : 894398 - 895945 bp Length : 1548 bp Strand : + Note : K03427 type I restriction enzyme M protein DNA sequence : ATGGCATTATCAAATGAACAAAAAAATAAAATGTGGGCCCTCTTAAATCAAACCCGAGGACAGATTGGTTTAACCGCCTA TAAAGACTACATTTTTGGCTTACTATTTTATAAATATTTATCAGAAAAGGCCACACAATGGCTGGGAGAAGTTTTACGAG GCGACACTTGGGAAAATGTTTATGGTCAAGATCCTGTAAGAGCCTTAGACTATATGAAACAAAAGCTCGGTTATGCCATC CAGCCTAAGGAATTTTTTAAAGATTGGGAAGCTGCCATTCATGAAGAACGATTTAACATTCCAATGATTTCAGATACATT TGGCCATTTTAATCAGCAAATTGCTTTTGAAGCGAAAGATGATTTTGAAGGTATCTTTGATGGGATGCGTTTTGATAGTT CTGATTTAGGAAGTAATGCGCAAGCTCGAGCAAGTGTGATGATCTCGATGATTGAGTTACTCTCTGCCCCTGAGTTTGAT CTCTCTACAGGAGGGGACACCGTTTCAGATATCTATGAATACTTGTTAGAAAAGTTTGCGACCGTATTGGCCTCAGACAT GGGACAATACTATACTCCCAAAGAAATTTCAGAGGTCATGGCTCGTATTTTGACTTTTGGTAAAGCCGACGAAGACAATT TCTCTATTTATGATCCAGCCGTCGGTTCAGCTTCTCTCTTAATTACTACCGCCAGTCATATGAAACATTCGAATCAAAGG GGAGCGATTAAATACTTTGGTCAAGAAAAAGATGCCACCCCTTACCGATTGGCTCGAATGAATTTAATGATGCATAACAT TGAATACAATGACATTCAGATCCATCATGCGGACACATTGGAGAGCGATTGGCCCGATGGAGTCATTGAGGGGAAAGATA CGCCTCGAATGTTTGACGCAGTGATGGCTAATCCACCTTATTCTGCCCATTGGAATAATAAGGATCGGGAAGATGACCCT CGATTTCGTGAATATGGCATTGCGCCAAAAACCAAAGCGGACTATTCTTTCTTGTTGCATTGTTTGTACCATACCAAAGA GAGTGGCCGCGTGGCCATTATCCTCCCACACGGAGTCTTGTTTAGAGGCGCTGCGGAAGGACGGATTCGAAAAGCTTTGA TTGATAAACATCAAATTGAAGCGGTGATTGGTTTTCCAGATAAACTCTTTTTGAACACAGGCATTCCTGTTTGTGTGTTA ATTCTTAAAAAGAATCGAGCAAATTCGGATATTCTTTTTGTGGATGCCAGTCAAGGCTTTGAAAAGATGAAGAATCAAAA ACAATTACGCCCAGAAGATATTGACAAGATCACTGAAACAGTCATTCATCGCAAGACGGTTGATAAATATAGCCACTTAG CAACGCTTGAGGAAGTCATTGAGAATGATTACAACTTAAATATTCCGCGTTATGTGGATACCTTTGAAGAGGAAGAACCG ATTGACTTAGAGGATATTCAAGGTCAAATAGATGAAGTAGACGCAGAGATTTCGAAAGCTGACCAAACCTTAGCAAGCTA CTTTAAGGAACTGGGAGTATTGAAATGA Protein sequence : MALSNEQKNKMWALLNQTRGQIGLTAYKDYIFGLLFYKYLSEKATQWLGEVLRGDTWENVYGQDPVRALDYMKQKLGYAI QPKEFFKDWEAAIHEERFNIPMISDTFGHFNQQIAFEAKDDFEGIFDGMRFDSSDLGSNAQARASVMISMIELLSAPEFD LSTGGDTVSDIYEYLLEKFATVLASDMGQYYTPKEISEVMARILTFGKADEDNFSIYDPAVGSASLLITTASHMKHSNQR GAIKYFGQEKDATPYRLARMNLMMHNIEYNDIQIHHADTLESDWPDGVIEGKDTPRMFDAVMANPPYSAHWNNKDREDDP RFREYGIAPKTKADYSFLLHCLYHTKESGRVAIILPHGVLFRGAAEGRIRKALIDKHQIEAVIGFPDKLFLNTGIPVCVL ILKKNRANSDILFVDASQGFEKMKNQKQLRPEDIDKITETVIHRKTVDKYSHLATLEEVIENDYNLNIPRYVDTFEEEEP IDLEDIQGQIDEVDAEISKADQTLASYFKELGVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR1899 | YP_041281.1 | type I restriction modification system modification protein | Not tested | vSa¥â | Protein | 4e-95 | 41 |
| SAMSHR1132_03780 | YP_005324900.1 | putative type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 2e-95 | 41 |
| SAS0394 | YP_042520.1 | restriction enzyme modification protein | Not tested | vSa¥á | Protein | 2e-95 | 41 |
| SAR0433 | YP_039884.1 | type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 2e-95 | 41 |
| SAMSHR1132_16570 | YP_005326167.1 | restriction-modification system, M subunit | Not tested | vSa¥â | Protein | 2e-95 | 41 |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 2e-96 | 41 |
