Gene Information

Name : ycfB (lilo_0210)
Accession : YP_007507538.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Unknown
Product : ABC transporter ATP binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 223016 - 223762 bp
Length : 747 bp
Strand : +
Note : K01990 ABC-2 type transport system ATP-binding protein

DNA sequence :
ATGACCTCACCAATAACTATTAATGATATTAGTGTGAAATTTGGCGATAAAGCAATATTAGACCATTTATCCTATGAATT
TGAAAGTGGAAAAATTATTTGTTTGATTGGACCTTCTGGAGCTGGGAAGTCAACCTTTATCAAAGCCATTGTTGGAATGC
AAAAATTGGATTCTGGCAATGTTGAGATTCTTGAAAGAAAAATTCCTGACAGAGAAGTATTAGGGAAATTAGGCTATATG
GCGCAAGAAGACGCTTTATTTAAGGAATTGACCGGCAAACAAAATTTAGAATTTTTTGGTTCTTTGCAGGGAATCCAAAA
AAAGGATTTACAAGACAAACTTGATAAGGCAGCTGCTACAGTAAATCTGACTAAGCAGTTAAATCAATCAATTTCTAATT
ATTCAGGAGGAATGCAAAGGCGCTTATCACTCGCTATTGCTCTGCAAACGGATGCTCCTATTTTACTTTTAGATGAACCA
ACTGTTGGGATTGATCCAGAATTACGTCAAGAAATTTGGGAAGAGCTGCGAAATCAAGCAAATCAAGGGAAAACAATATT
AATTACGACGCATGTTATGGATGAAGCTGAACGTTGTGATGTCGTACTGATGCTTAGAAATGGTAAATTTATAGCAGAAG
GTTCGCCAAAGGAAATTAAGGAAAAGTATCAAGTTGCCTCGGTTGAGGAAGCCTTTATTGTTGCGGGAAAAAATTTAGAG
TTAGAACATAAGGGGGCAGCGAAATGA

Protein sequence :
MTSPITINDISVKFGDKAILDHLSYEFESGKIICLIGPSGAGKSTFIKAIVGMQKLDSGNVEILERKIPDREVLGKLGYM
AQEDALFKELTGKQNLEFFGSLQGIQKKDLQDKLDKAAATVNLTKQLNQSISNYSGGMQRRLSLAIALQTDAPILLLDEP
TVGIDPELRQEIWEELRNQANQGKTILITTHVMDEAERCDVVLMLRNGKFIAEGSPKEIKEKYQVASVEEAFIVAGKNLE
LEHKGAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 4e-53 50
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 1e-42 49
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 5e-55 49