Gene Information

Name : ywaE (lilo_2115)
Accession : YP_007509437.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2269804 - 2270283 bp
Length : 480 bp
Strand : -
Note : K00783 hypothetical protein

DNA sequence :
ATGAAGATTAAATTAGTAGTTGTTGGAAAACTTAAAGAAAAGTATTTAAAAGATGGAATTGCTGAATATGTTAAACGAAT
GGGAACGATGCTGCCACTTGAAATTATTGAGCTAGCAGATGAAAAAATTCCAGATAATGCTTCCGAAAAAGAAGCAGAGG
CGTTGAAAAAACGTGAAGGTGAGAAAATTTTATCACGGATTCAAGCAGGAGATAAGTTAGCGATTTTAGCCATTCAAGGA
AAATTAATGTCATCAGAGGAAGTGGCTGATTTTGTGAAGAAAGCTGAAGTTTACGGAACAGGAAATCTTGTTTTTGTAAT
TGGAGGTTCTTTAGGACTTTCAAAGGAAGTTTATCAACGAAGTGATTTGCAAATTTCTTTTGGGCGAATGACACTCCCTC
ATCAACTGATGCGTCTGGTTTTAGTAGAACAAATTTATCGGGCACAAATGATTAATCGAGGTTCGGCTTATCATAAGTAA

Protein sequence :
MKIKLVVVGKLKEKYLKDGIAEYVKRMGTMLPLEIIELADEKIPDNASEKEAEALKKREGEKILSRIQAGDKLAILAIQG
KLMSSEEVADFVKKAEVYGTGNLVFVIGGSLGLSKEVYQRSDLQISFGRMTLPHQLMRLVLVEQIYRAQMINRGSAYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 4e-38 53
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-38 53
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 4e-38 53
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-38 53
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 4e-38 53
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 4e-38 53
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 4e-38 53
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 4e-37 53
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 4e-38 53
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 4e-38 53
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 4e-38 53
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 4e-38 53
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 4e-38 53
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-32 51
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-35 51
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-35 51
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 6e-37 51
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 6e-23 50
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-35 48