Gene Information

Name : yudA (lilo_1941)
Accession : YP_007509263.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Resistance
Product : transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2105761 - 2106381 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence :
ATGGTTAATATGTTTTCAGTTATAATAAATTCAACGGTTATCTACTGGGCAACAGCCCTAGATTTACTTATATTACTAGC
AATATTATATGTTCGTTTTGATAAAAAAAGTCATTTATCTATTACTTTGGGACAAATAATTGGTTCTTTTGCACTTGTAT
TGGTCAGTTTATTTTTTGCGGTCATCCTAAAACTTGTTCCAGAAGAGTGGATTTTAGGCTTACTGGGCCTGATTCCTTTA
GGACTAGGAATAAAATATTTATTCTTTGGGGATGATGATGACGATGAAGAATTAGATGAATTGCTACAAAAAAGGAAAAA
TAAAAGCTTGCTTGGAACTGTTATTATCATTTCTTTTGCGAGTTGTGGAGCGGATAACATTGCTTTGTTTACTCCATTTT
TTATGACACTGTCAGCAAATAATTTGCTATTATCTATAATAATTTTTGCCTTAAACATATTAATTTTAGGGCTTCTTGGA
AAAACAATTGCAAAAATTCCTCACCTTCATGACGTTTTAGAAAAAAACAGTCGTTGGATTCTTGCTTTTGTTTATATAAT
ACTTGGAATAATGGTTTTACTAGAAAGTGGAACAGTCTCCAAAATTCTCAGTTTTTTGTAA

Protein sequence :
MVNMFSVIINSTVIYWATALDLLILLAILYVRFDKKSHLSITLGQIIGSFALVLVSLFFAVILKLVPEEWILGLLGLIPL
GLGIKYLFFGDDDDDEELDELLQKRKNKSLLGTVIIISFASCGADNIALFTPFFMTLSANNLLLSIIIFALNILILGLLG
KTIAKIPHLHDVLEKNSRWILAFVYIILGIMVLLESGTVSKILSFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 1e-14 44
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 6e-16 44
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 3e-14 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yudA YP_007509263.1 transport protein BAC0057 Protein 7e-16 45