Gene Information

Name : serS (lilo_1688)
Accession : YP_007509011.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1837383 - 1838654 bp
Length : 1272 bp
Strand : +
Note : K01875 seryl-tRNA synthetase

DNA sequence :
ATGCTTGATATTAAAAAAATTCGTGCTGATTTTGACGGTGTTGCTGCAAAATTAGCCACTCGTGGTGTTGAAAAAGAGAA
ACTTGAAAAACTTCATGACTTAGACATTAAACGTCGTGAACTCATTGTAAAATCTGAGGCTTTGAAAGCTGAACGTAATA
GCGTTTCTGATGAAATTTCTCAAGTAAAACGTGCAAAAGGTGATGCCAGCGCACAAATTGCTGCAATGCAAAAAGTTTCT
GCTGAAATCAAAGCCATTGATACTGAACTTACTGAAATCGAAGAAAACTTGAATGAAATCATTATCATGTTGCCAAATCT
TCCTCATGAAAGTACACCAATTGGTGCTGATGAAGATGATAATGTTGAGGTTCGTCGTGTTGGTCAAACTCCAACTTTCA
ATTTTGAACCTAAAGCTCACTGGGATTTGGGTGAAGATTTAGGAATTTTGGATTGGGAACGTGGTGGTAAAGTCACTGGT
TCACGTTTCCTTTTCTACAAAGGTGCTGGCGCAAGACTTGAACGTGCACTTTATAACTTCATGCTTGATGAGCACGGTAA
AGAAGGTTATACTGAAATGATTACTCCTTATATGGTTAATCAAGAATCAATGTTTGGAACGGGTCAATATCCTAAATTTA
AAGAAGACACTTTTGAATTGAAAGATGACCGTGGTTTTGTTTTAATTCCAACTGCTGAAGTTCCTTTGACTAACTACTAT
CGTGGGGAAATTTTGGATGGCGCAGAATTGCCAATCAAATTCACAGCAATGAGTCCTTCTTTCCGTTCTGAAGCTGGTTC
TGCTGGTCGTGATACGCGTGGTTTGATTCGTTTGCACCAATTCCATAAAGTTGAAATGGTTAAATTTGCTAAACCTGACC
AATCTTATGATGAACTTGAAAAAATGACAGCAAACGCTGAAAATATTCTGCAAAAATTGGGGCTTGCTTACCGTGTTGTG
GCTTTGTCAACTGGTGACATGGGATTCTCTGCTGCTAAAACTTATGATTTAGAAGTTTGGATTCCTGCACAAAATACTTA
CCGTGAAATTTCTTCATGTTCAAACTGTGAAGATTTCCAAGCCCGTCGTGCCCAAATTCGTTATCGTGACGAAGAGGGTA
AAGTTCAACTTGTTCACACTTTGAATGGTTCTGGACTTGCTGTTGGACGTACTGTGGCTGCTATTCTTGAAAATTATCAA
AATGAAGATGGTTCAATCACTGTTCCTGAAGTCCTTCGTCCTTATATGGGTGGACTTGAAGTGATTAAATAA

Protein sequence :
MLDIKKIRADFDGVAAKLATRGVEKEKLEKLHDLDIKRRELIVKSEALKAERNSVSDEISQVKRAKGDASAQIAAMQKVS
AEIKAIDTELTEIEENLNEIIIMLPNLPHESTPIGADEDDNVEVRRVGQTPTFNFEPKAHWDLGEDLGILDWERGGKVTG
SRFLFYKGAGARLERALYNFMLDEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKDDRGFVLIPTAEVPLTNYY
RGEILDGAELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAENILQKLGLAYRVV
ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRYRDEEGKVQLVHTLNGSGLAVGRTVAAILENYQ
NEDGSITVPEVLRPYMGGLEVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 2e-162 80