Gene Information

Name : pdp (lilo_1359)
Accession : YP_007508682.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1478635 - 1479927 bp
Length : 1293 bp
Strand : -
Note : K00756 pyrimidine-nucleoside phosphorylase

DNA sequence :
ATGACCTATCGGATGGTTGATCTCATTCAAAAGAAAAGAGATGGTGGTGAATTTAGCCAAGCTGAAATCGATTGGATGAT
TGAAAATTATGTCAAAGGAATCGTGCCAGACTATCAAATGTCAGCACTTGCGATGGCAATTTATTTTAAAGGGATGACTA
CAGAAGAAACTGCTCATCTCACGCTGGCAATGGTTCATTCAGGAAAAGAATTCGATTTGACTGATATTGCCGGAATCAAG
GTTGATAAACATTCTACTGGTGGAGTGGGTGATAAAGTAACACTTATTTTAGCTCCGCTTGTAGCGTCATTTGGGGTTCC
TGTTGCGAAAATGTCTGGTCGTGGGCTTGGACATACGGGAGGAACTTTGGACAAATTGGAATCAATTCCTGGCTTCAAAT
TTGAAAAAACGGAAAAAGAATTTATTGATCAGGTCAAAGAAACAGGAATTGCCATAATTGGGCAATCCGATGAACTTGTT
AAAGCCGATAAATTACTCTATGCTCTTCGAGATGTCACAGCAACTGTTGATATTATTCCTCTAATTGCTAGTTCTGTCAT
GTCCAAAAAAATTGCCGCAGGCTCTGACGCCATTCTACTAGATGTAACTGTAGGAGATGGGGCTTTTATGAAGTCAGTTG
AAGATGCTCGCCTTCTCGCTCAAACAATGGTTGACCTTGGTAAATCTGTAGGACGAGAAACCGTCGCTGTCATCACAAAT
ATGAGTCAGCCTCTTGGTTTTGCTATCGGAAATCGAAATGAAATGACTGAAGCAGTTCATACTCTACAAGGAAAAGCACC
AAAGGAATTCCAAGAATTTATTGCGGAACTTGCCCAAATTATGCTGCAACTTGCGGGACTTGAAAAATCAATTCCTGAAA
TTTTAGAGCATTTTACTAATGGTTTAGCTTACGGAAAATTTGTTGAAATGGTCAAGGCCCAAGGTGGTGACCCAACTGCC
TTTGACTATTTGACAGCCCCTCTTCAAGTAAAATATCAAGTGGAAATTAAAGCAGATAAATCAGGATTTATTAGTGAAGA
AAAAGCCTTAGGAATTGGTCTTCTTGCTATGAAATTAGGAGCAGGACGTGCAACTAAGACTGATGATATTGATTTTGAAG
CAGGTGTTACTCTGACGAAAAAGGTAGGAGATAAGGTGAGTGCCGGTGAAGTCATTGCTCAGCTTTATTCCAACCGCGAA
ATTACTGACGAATTAGTTGCTGAATTTAATGACAGTTTGGTCATTAGTGATCAACAAGTTCATCAAAAAGAAATTCTAGA
AATTATCAGATAA

Protein sequence :
MTYRMVDLIQKKRDGGEFSQAEIDWMIENYVKGIVPDYQMSALAMAIYFKGMTTEETAHLTLAMVHSGKEFDLTDIAGIK
VDKHSTGGVGDKVTLILAPLVASFGVPVAKMSGRGLGHTGGTLDKLESIPGFKFEKTEKEFIDQVKETGIAIIGQSDELV
KADKLLYALRDVTATVDIIPLIASSVMSKKIAAGSDAILLDVTVGDGAFMKSVEDARLLAQTMVDLGKSVGRETVAVITN
MSQPLGFAIGNRNEMTEAVHTLQGKAPKEFQEFIAELAQIMLQLAGLEKSIPEILEHFTNGLAYGKFVEMVKAQGGDPTA
FDYLTAPLQVKYQVEIKADKSGFISEEKALGIGLLAMKLGAGRATKTDDIDFEAGVTLTKKVGDKVSAGEVIAQLYSNRE
ITDELVAEFNDSLVISDQQVHQKEILEIIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 6e-85 45