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Name : CLOAM1390 (CLOAM1390) Accession : YP_001741448.1 Strain : Candidatus Cloacamonas acidaminovorans Evry Genome accession: NC_020449 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1624701 - 1626410 bp Length : 1710 bp Strand : - Note : - DNA sequence : ATGGTTTATAATCCACAATTTGCCCGTCTGGGAGATATCCTGGTGCACGAGGGATATATCACAGAAGAACAATTGAAAGA TGCATTGCTCAAGCAGGGAAATTTCGGCTTGAAATTGGGTGAGACACTTATCAAGCTGGGTTATCTAACAGAAAATGAAC TTCTTGAAGCATTACATAAACAACTTGGCTATGATGTTGTTCAAGATAAAGAATTAATGGACCTGGATATAAATATTGTA AGTTCAATTCCGGAGCCCTACGCCAAAGAAAATAAAGTTTTGGCTTTACGCGAAGAGGGCGATGGAGTAGTAGTAGCAAT GACAGATCCGGAAAACTTGATTGTTTCGGACAGCTTGGAAAAAATATTGGGCAAAAATATCAAGCCGGTTTTAATTGGCA ATTCTTCTTTACAGGATGCCATAGAAAAGTATTATAAAAGTATTCGGACAACTACTGAGGTAGAAGATGCCGTAGGTGGT TTTGAATTTGTAGCAGTGGATGAAGACGAGAACGAAATCACTATTGCTGCTGCTACGGAAGATGTAGATGCACCAGTAGT TAAGATGATCAATCTTATCATCAATGAGGCAATTAAAGCCGGAGCTACGGATATTCATATTGAACCTTTAACGAAAATAT CACGGATTCGTTATCGGGTAGATGGTGCCTTGCGCGAAGTTATGACGCCTCCGATAGGAATGCATCCCAGTTTGATTTCC CTGGTTAAGGTTATGAGTAAATTGAATATTGCCGAACGCCGTTTGCCTCAAGATGGTCATATTTCCCTAAAAACCGCGAT GAAAAGTGTAGATGTTCGTGTTTCCATTACTCCTACTGTTTTAGGTGAAAAAGTAGTGATGCGTCTTTTAGATAAGGGAG AATTTGGATTCAAACTTACCACTTTAGGATTTGAAGAAGACGATATGGATATCTTTAAAAAAATTATCCGTCGTCCTTAT GGCATTATTATTGTTTCAGGACCTACAGGAAGCGGAAAATCCACTACTCTTCACGCGGCACTAAAAGAAATAGAAAACAT AGAATCTAATATTATAACTGTGGAAGACCCCGTTGAATACCGTCTGGAAGGAGTAACGCAAATTGAAACCAAAGAGCAGA TAGGTCTCACCTTCGGTTCTGCTTTGCGTTCAGTTTTGCGTCAAGACCCCGATATTGTTCTCATTGGAGAAATTCGTGAT GAAGAAACAGCTGATATTGCTATTAAATTTTCATTAACCGGTCACCTGGTTTTTACTACTTTGCATGCCAATGATGCTCC TGCAACTATTACCCGTATGATAGATATTGGCATTAAACCCTATCTTGTTGGTTCTTCCTTATCACTGGTGATGGCACAAC GTTTAGTGCGTAAAATTTGTAAGTATTGTATCAAGGATTATATCCCTACGGAGCAGGAAATTCAGGATGCCGGTTTAACG CCTGAAGAAGCAAGTAAAATCAATTTTAAGATTGGAACGGGATGTGTTCATTGTGATAATACCGGTTATTCGGGACGAGA AGGTATCTTTGAATTGCTGACCATAAATCCTGAAATCCGCAGGATTATCTATGAAGGCGGAAATCAAGACCTTATTCGGG AAGCGGCATTAAGAAATGGTATGCGGACTCTTCACGATGCTGCTATCACTAAAATGAAAAAGGGAATAACCACAATCAAG GAAGTCATCAAGATGACTGTAGTTGAATAA Protein sequence : MVYNPQFARLGDILVHEGYITEEQLKDALLKQGNFGLKLGETLIKLGYLTENELLEALHKQLGYDVVQDKELMDLDINIV SSIPEPYAKENKVLALREEGDGVVVAMTDPENLIVSDSLEKILGKNIKPVLIGNSSLQDAIEKYYKSIRTTTEVEDAVGG FEFVAVDEDENEITIAAATEDVDAPVVKMINLIINEAIKAGATDIHIEPLTKISRIRYRVDGALREVMTPPIGMHPSLIS LVKVMSKLNIAERRLPQDGHISLKTAMKSVDVRVSITPTVLGEKVVMRLLDKGEFGFKLTTLGFEEDDMDIFKKIIRRPY GIIIVSGPTGSGKSTTLHAALKEIENIESNIITVEDPVEYRLEGVTQIETKEQIGLTFGSALRSVLRQDPDIVLIGEIRD EETADIAIKFSLTGHLVFTTLHANDAPATITRMIDIGIKPYLVGSSLSLVMAQRLVRKICKYCIKDYIPTEQEIQDAGLT PEEASKINFKIGTGCVHCDNTGYSGREGIFELLTINPEIRRIIYEGGNQDLIREAALRNGMRTLHDAAITKMKKGITTIK EVIKMTVVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-82 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLOAM1390 | YP_001741448.1 | type IV pilus biogenesis protein PilB | VFG0182 | Protein | 4e-86 | 42 |
| CLOAM1390 | YP_001741448.1 | type IV pilus biogenesis protein PilB | VFG2048 | Protein | 3e-83 | 42 |
