Gene Information

Name : HydHO_0910 (HydHO_0910)
Accession : YP_007500272.1
Strain : Hydrogenobaculum sp. HO
Genome accession: NC_020411
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.-.-
Position : 847435 - 848274 bp
Length : 840 bp
Strand : +
Note : IMG reference gene:2506377821; PFAM: 4Fe-4S dicluster domain; 4Fe-4S binding domain; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0936 hypothetical protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPr

DNA sequence :
ATGGATAGAAGAGGTTTTTTCAAAGCCATAGGCGCCGCTATTGGCGTTGTAGCATCTGAAAAAGCTGCAGAAGCTATGGA
AATACCTCCTATGCTTACAATACCTGGAAGAGAGGAAAACAATCCTCAGTGGGTAGGCCAAAAAGGCAAGAAATTTGCCA
TGGTTATGGATTTAAGGAAATGCATAGGATGCCAAGCTTGCACGTCTGCTTGTGTTATAGAAAACGATGTACCCACAGAT
CAATACAGAACATACGTACCTGAATATGAAGTTGGCACTTTTCCAAACGTAAGAAAAGTTTTTTTACCTCAGCTTTGTAA
CCACTGCGAAAATCCTCCTTGCGTTCCTGTTTGTCCAACCGGTGCCACTTACAAAAGACAAGATGGTATAGTGGTAGTTG
ACAACACGATATGCTGGGGTTGTGGATACTGTGTAAACGCTTGCCCTTACGACAAAAGATTCATGAACGAAAAAAGTCAT
GTAGCAGACAAGTGTACTTTTTGCGCTCACAGGGTAGATAACGGCATGCTACCAGCTTGCGTAGAATCGTGCGTAGGCGG
GGCGAGAATATTTGGAGATTTAAACGATCCAAACAGTGAAGTTTCAAGGCTTATAAGAACATATCCGGTAAACGTTTTAA
GACCTGAGCAAGGCACTATACCAAACGTATTTTACATAAACCTCTACGGAGAGCTTCAAGATACACCACCTACTAACTTT
GAAAGCTTGGATGACCTTGCCAGAGAATATTACAAAATAAAATCTGAAGAGTCCGAGTGGATGATTTTAAAGCCGCTTCA
AGATATAGTAAATGTGGAGGATTACAAACATGATGCTTGA

Protein sequence :
MDRRGFFKAIGAAIGVVASEKAAEAMEIPPMLTIPGREENNPQWVGQKGKKFAMVMDLRKCIGCQACTSACVIENDVPTD
QYRTYVPEYEVGTFPNVRKVFLPQLCNHCENPPCVPVCPTGATYKRQDGIVVVDNTICWGCGYCVNACPYDKRFMNEKSH
VADKCTFCAHRVDNGMLPACVESCVGGARIFGDLNDPNSEVSRLIRTYPVNVLRPEQGTIPNVFYINLYGELQDTPPTNF
ESLDDLAREYYKIKSEESEWMILKPLQDIVNVEDYKHDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-56 49
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-56 49
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-56 49
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-56 49
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HydHO_0910 YP_007500272.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 1e-56 49