Gene Information

Name : HydHO_0562 (HydHO_0562)
Accession : YP_007499935.1
Strain : Hydrogenobaculum sp. HO
Genome accession: NC_020411
Putative virulence/resistance : Resistance
Product : Protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 499541 - 499942 bp
Length : 402 bp
Strand : -
Note : IMG reference gene:2506377457; PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight;

DNA sequence : 
ATGAACATAGCTTTTATATGTGTGGGAAACTCTTGTAGAAGCCAAATGGCAGAGGGCTATGCAAAGCATTTTTTAAAGGA
TTTAAAATCCAAACACAACATATACTCCGCTGGGATGAACCCAAAAGATCAAATACATCCTTTGGCCATAGAGGTAATGA
AAGAAGATGGGATAGATATAAGTTCTCAATATCCAAAAGCCTTGGAAGATATACCTCTAAAAGACCTTGATATATATATC
ACACTATGCGGTGAAGAGGCTTGCCCAAACATACCAGGAGTTAAACATCTTCACTGGGGTTTAGAAGACCCAGCCAAAAC
AAACGATATAAACGTTTTTAGAAGCGTTAGAGACATCATAAAACAAAAGGTAAAAGATTTTTTGTATGAACTTGAAACTT
AA

Protein sequence : 
MNIAFICVGNSCRSQMAEGYAKHFLKDLKSKHNIYSAGMNPKDQIHPLAIEVMKEDGIDISSQYPKALEDIPLKDLDIYI
TLCGEEACPNIPGVKHLHWGLEDPAKTNDINVFRSVRDIIKQKVKDFLYELET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 1e-20 45
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 1e-18 44
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 1e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HydHO_0562 YP_007499935.1 Protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 2e-20 46
HydHO_0562 YP_007499935.1 Protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 4e-19 45
HydHO_0562 YP_007499935.1 Protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 5e-21 44