Gene Information

Name : HydHO_1530 (HydHO_1530)
Accession : YP_007500881.1
Strain : Hydrogenobaculum sp. HO
Genome accession: NC_020411
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1456819 - 1457547 bp
Length : 729 bp
Strand : +
Note : IMG reference gene:2506378460; PFAM: ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; KEGG: polysaccharide ABC transporter ATP-binding protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate

DNA sequence :
ATGAGCGTTGTGATAGAGGTAAAAAATGTTACAAAGATCTTTAAAAGGCATACGAAAAAATATTTTTCCATAAAGTCTGC
TTTTGTGGATTTTATAAAACACGGTAGACCACAAGTGCAGATAGTAAAAGCCCTTGACAATATAAGCTTTGATATGGTAT
CTGGAAGCACTTTGGGTATCATAGGGAAAAACGGCGCTGGTAAATCCACCCTTCTTAAAATAATATCTGGCATCATAAAA
CCCACTTCTGGAAGCGTAAAGGTAAAAGGAAGCTTAGTACCTCTTTTGGAGCTTGGCACTGGTTTTCATCCGGAGCTCAC
CGGTAGAGAAAACATCATCATAAGCGGTCTTATACTTGGGCTTTCCAAAAAAGAGATATACAAGAAAATAGATGAGATAA
TAGAGTTTGCAGAGTTAAAAGATGTGATAGATGAACCTGTAAGGACTTACTCTTCTGGTATGTATTCAAGGCTTGCTTTT
TCTACGGCTTTTAGTATAGACCCAGATATTATAATCTTGGATGAGATACTATCAGTAGGTGATATAGCTTTTATGAAAAA
AAGCAAAGAAAAGGTAAAAGAGTTTAAAAGAAGAAACAAAACGATATTGTTTGTAAGCCATGATATGACAAGTGTAAAAG
AGATGTGTGATGAAGCTATTTATATAGACAAAGGTAGGCTAATCCAAAGAGGGAAGGTAGATAATGTGGTGAGTTTGTGC
GGTTTATAA

Protein sequence :
MSVVIEVKNVTKIFKRHTKKYFSIKSAFVDFIKHGRPQVQIVKALDNISFDMVSGSTLGIIGKNGAGKSTLLKIISGIIK
PTSGSVKVKGSLVPLLELGTGFHPELTGRENIIISGLILGLSKKEIYKKIDEIIEFAELKDVIDEPVRTYSSGMYSRLAF
STAFSIDPDIIILDEILSVGDIAFMKKSKEKVKEFKRRNKTILFVSHDMTSVKEMCDEAIYIDKGRLIQRGKVDNVVSLC
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HydHO_1530 YP_007500881.1 ABC transporter related protein VFG1449 Protein 1e-13 41