Gene Information

Name : HydHO_1121 (HydHO_1121)
Accession : YP_007500479.1
Strain : Hydrogenobaculum sp. HO
Genome accession: NC_020411
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1039052 - 1040413 bp
Length : 1362 bp
Strand : +
Note : IMG reference gene:2506378037; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; KEGG: tal:Thal_1009 thiamine bios

DNA sequence :
ATGAGAGAAGATTGGAGCCTAAGAAGCAACTGGACCAATAAAACACAAATGCACCTTGCAAGGCAAGGTATTATAAGTGA
AGAAATGCGTTATGTGGCAAAGGTAGAAGGTCTTCACCCAGAGTTTGTACGTCAAGAGGTGGCAAGAGGCCGTATGATAA
TACCTGCCAACATAAACCATAGACACTTAAAACCTATGTGTATAGGTATAAATTCAAAAGTTAAAGTAAATGCAAATATA
GGAAACTCAAAGCTTGCATCAGATATACCACAAGAGATAGAGAAAGCAAAAATCTCCATCAAGTATGGCGCAGATACAAT
AATGGATCTATCCACTGGTGAAGCTATAAAAGAAACAAGAGAAGCTATTATAAATGCAGTTGATGTGCCAGTAGGTACAG
TGCCAATATATGAAGCTTTTAAGATAGCAAAAAATAGAATAAAGGATATTACCGAAGATCTTATTTTAGATGTAATAGAA
GAACAAGCAAGGCAAGGCGTTTCTTATATGACCATTCACGCTGGCGTGCTAAAGGAGTTTATACCCCTTACTACTCATAG
AGTTATGGGCATAGTATCAAGAGGCGGTGCCCTCATGGCACAGTGGATGCTAGAGCATGGAAAGCAAAACCCTCTTTATA
CAAACTTTGATAAAATATGTGAGATATTTAAAAAATACGACGTATCTTTTTCTTTAGGAGATGGGCTAAGACCTGGAGCC
ATAGCAGATGCATCAGACGAAGCTCAGTTATCAGAGCTTATGGTGCTTGGAGAGCTCACAAAGAAAGCATGGGAGCACGA
TGTACAGGTAATGGTGGAAGGACCTGGGCATGTACCGATGAATCAAATAGAGTTTAATATGAAAATCCAACAAAAATACT
GTCATGAAGCACCATTTTATGTACTTGGTCCTTTGGTGATAGATGTGGCGCCAGGTTATGATCACATAGCTTCTGCTATA
GGTGCTGCAATGGCTGGTTGGTATGGGGCTGCTATGCTTTGTTATGTGACTCCAAAAGAACATCTTGGTTTACCTAATCT
AGAAGATGTAAAACAAGGTCTCATAGCTTACAAGATAGCTGCTCACGCTGCAGATGTGGCAAAAGGTTTACCAGGAGCTA
GAGAATGGGACTTAGAAATGTCAAAAGCAAGATACGCTTTTGATTGGAATCGCCAATTTGAACTTGCCATAGACCCAGAA
ACCGCAAGAGCTTACCACGATGAAACGCTTCCACAAGAAGGATACAAGACTGCAAAATTCTGTTCTATGTGTGGACCTGA
GTTTTGTTCTTACCGTATATCTCAAAACGTGAAAACAGACTTTGAAGAGCAACTAGCTGAAGGTACATGGCAAACCCCTT
GA

Protein sequence :
MREDWSLRSNWTNKTQMHLARQGIISEEMRYVAKVEGLHPEFVRQEVARGRMIIPANINHRHLKPMCIGINSKVKVNANI
GNSKLASDIPQEIEKAKISIKYGADTIMDLSTGEAIKETREAIINAVDVPVGTVPIYEAFKIAKNRIKDITEDLILDVIE
EQARQGVSYMTIHAGVLKEFIPLTTHRVMGIVSRGGALMAQWMLEHGKQNPLYTNFDKICEIFKKYDVSFSLGDGLRPGA
IADASDEAQLSELMVLGELTKKAWEHDVQVMVEGPGHVPMNQIEFNMKIQQKYCHEAPFYVLGPLVIDVAPGYDHIASAI
GAAMAGWYGAAMLCYVTPKEHLGLPNLEDVKQGLIAYKIAAHAADVAKGLPGAREWDLEMSKARYAFDWNRQFELAIDPE
TARAYHDETLPQEGYKTAKFCSMCGPEFCSYRISQNVKTDFEEQLAEGTWQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-118 61
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-118 61