|
Name : ydeM (BAM5036_0475) Accession : YP_007496207.1 Strain : Bacillus amyloliquefaciens UCMB5036 Genome accession: NC_020410 Putative virulence/resistance : Unknown Product : putative dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 509505 - 509930 bp Length : 426 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme DNA sequence : ATGAAGTTGGATGAATTTACCGTCGGGCAGGTTTTTCAAACTAAATCTTTTGAATTAACAAAAGAGAATATAAAGAATTT TGCAGAAGTGTATGACCCACAATACATGCATTTAAATGAAGAAAAAGCAAAAATAGGCAGGTTTAATGGAATTATTGCTT CTGGAATACAAACGTTATCTATTACTTTTAAGCTTTGGATTGAAGAAGGGTGTCATGAAGACGATATTATTGCTGGGACA GGAATGAATAATATAAAATTCCTAGCACCCGTTTACCCTAATGATAAACTGAACACTATTGTTAAGGTTATTGATAAAAA ACCAAATAAAAGCCAGACGGGGATACTTACTGTATTGTTATCTACCTATAATCAGAAAGAGGAAAAAGTGTTTGAAGGTG AGTTATCAGTATTAATTAAACGCTAA Protein sequence : MKLDEFTVGQVFQTKSFELTKENIKNFAEVYDPQYMHLNEEKAKIGRFNGIIASGIQTLSITFKLWIEEGCHEDDIIAGT GMNNIKFLAPVYPNDKLNTIVKVIDKKPNKSQTGILTVLLSTYNQKEEKVFEGELSVLIKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAA94333.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 7e-37 | 55 |
| unnamed | BAB72133.1 | hypothetical protein | Not tested | Type-IVb SCCmec | Protein | 5e-37 | 54 |
| SAPIG0041 | YP_005732851.1 | MaoC like domain, putative | Not tested | Type-V SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAA82222.2 | - | Not tested | Type-II SCCmec | Protein | 5e-37 | 54 |
| SAUSA300_0031 | YP_492751.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAD24825.1 | conserved hypothetical protein | Not tested | Type-V SCCmec | Protein | 5e-37 | 54 |
| SERP2522 | YP_190063.1 | acyl dehydratase MaoC | Not tested | Type-II SCCmec | Protein | 7e-37 | 54 |
| maoC | YP_184943.1 | MaoC domain-containing protein | Not tested | Type-I SCCmec | Protein | 7e-37 | 54 |
| unnamed | ACL99837.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 5e-37 | 54 |
| SH0090 | YP_252005.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-37 | 54 |
| SAR0038 | YP_039514.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAG06198.1 | MaoC domain protein dehydratase | Not tested | Type-VII SCCmec | Protein | 5e-37 | 54 |
| SAMSHR1132_00310 | YP_005324555.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAB47625.1 | hypothetical protein | Not tested | Type-III SCCmec | Protein | 5e-37 | 54 |
| MW0030 | NP_644845.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAC57477.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 5e-37 | 54 |
| SAV0040 | NP_370564.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-37 | 54 |
| unnamed | BAB72114.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 5e-37 | 54 |
| SA0037 | NP_373277.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-37 | 54 |
