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Name : yycF (BAM5036_3661) Accession : YP_007499313.1 Strain : Bacillus amyloliquefaciens UCMB5036 Genome accession: NC_020410 Putative virulence/resistance : Virulence Product : two-component response regulator [YycF] Function : - COG functional category : - COG ID : - EC number : - Position : 3844044 - 3844754 bp Length : 711 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9384377, 9829949, 10878122, 15153768, 12950927,17581128; Product type r : regulator DNA sequence : ATGATGGATAAGAAAATCCTTGTAGTCGATGATGAAAAACCGATTGCAGATATATTAGAGTTTAATTTAAGAAAAGAAGG CTATGACGTGCATTGTGCGTACGACGGAAACGAAGCCGTGGAAATGGTGGAGGAGCTTCAGCCTGATTTAATTCTTTTAG ATATTATGCTTCCGAATAAAGACGGAGTTGAAGTGTGCCGGGAAGTCCGGAAAAAATATGATATGCCGATTATTATGCTG ACGGCAAAAGACTCGGAGATTGACAAGGTCATCGGGCTTGAAATCGGAGCGGATGACTATGTCACGAAGCCTTTCAGCAC GCGTGAGCTTCTGGCCCGCGTCAAAGCGAACCTGCGCCGCCAGCTTACGGTTGCGCCGGCTGAGGAAGAATCAGCTTCTA ATGACATTCATATCGGTTCTCTCGTCATCTTCCCTGACGCTTATGTCGTATCAAAAAGAGAAGAAACGATCGAGCTGACT CATCGTGAGTTTGAATTGCTTCATTACTTAGCCAAACATATCGGACAGGTTATGACGCGTGAGCATCTGCTGCAGACTGT GTGGGGCTATGACTATTTCGGTGATGTGAGAACGGTGGATGTAACAGTGCGCCGTCTCCGTGAGAAAATCGAGGATAATC CGAGCCATCCGAACTGGATCGTCACAAGACGGGGTGTCGGTTATTACTTGAGAAACCCTGAACAGGACTAA Protein sequence : MMDKKILVVDDEKPIADILEFNLRKEGYDVHCAYDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIML TAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTVAPAEEESASNDIHIGSLVIFPDAYVVSKREETIELT HREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-31 | 43 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 3e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_012469.1.7685629. | Protein | 1e-65 | 68 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002745.1124361.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_009782.5559369.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002951.3237708.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_007622.3794472.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002758.1121668.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_009641.5332272.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_013450.8614421.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_007793.3914279.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002952.2859905.p0 | Protein | 3e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_003923.1003749.p0 | Protein | 2e-53 | 56 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | HE999704.1.gene2815. | Protein | 4e-47 | 52 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AE016830.1.gene1681. | Protein | 4e-45 | 49 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_012469.1.7686381. | Protein | 3e-43 | 49 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | FJ349556.1.orf0.gene | Protein | 6e-40 | 47 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | HE999704.1.gene1528. | Protein | 5e-32 | 45 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AF155139.2.orf0.gene | Protein | 9e-37 | 45 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AM180355.1.gene1830. | Protein | 8e-39 | 45 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AE000516.2.gene3505. | Protein | 5e-37 | 45 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_014475.1.orf0.gen | Protein | 8e-38 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_005054.2598277.p0 | Protein | 8e-38 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_007622.3794948.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_003923.1003417.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_013450.8614146.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002951.3238224.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_007793.3914065.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002758.1121390.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_010079.5776364.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002952.2859858.p0 | Protein | 3e-34 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AF130997.1.orf0.gene | Protein | 2e-36 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | DQ212986.1.gene4.p01 | Protein | 8e-37 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AE015929.1.gene1106. | Protein | 2e-29 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | BAC0596 | Protein | 2e-27 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP000034.1.gene2186. | Protein | 6e-29 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | NC_002695.1.916589.p | Protein | 5e-29 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP001138.1.gene2239. | Protein | 2e-27 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP001918.1.gene3444. | Protein | 3e-28 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | BAC0039 | Protein | 6e-29 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | AF162694.1.orf4.gene | Protein | 6e-33 | 41 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP001918.1.gene5135. | Protein | 7e-27 | 41 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP004022.1.gene3215. | Protein | 1e-34 | 41 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP004022.1.gene1676. | Protein | 6e-28 | 41 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | CP000647.1.gene2531. | Protein | 4e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | VFG1563 | Protein | 1e-31 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | VFG1389 | Protein | 1e-28 | 43 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | VFG1390 | Protein | 5e-35 | 42 |
| yycF | YP_007499313.1 | two-component response regulator [YycF] | VFG1702 | Protein | 1e-31 | 41 |
