Name : epsC (BAM5036_3080) Accession : YP_007498751.1 Strain : Bacillus amyloliquefaciens UCMB5036 Genome accession: NC_020410 Putative virulence/resistance : Virulence Product : Probable polysaccharide biosynthesis protein epsC Function : - COG functional category : - COG ID : - EC number : 5.1.3.2 Position : 3264159 - 3265976 bp Length : 1818 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 15661000, 17704766; Product type pe : putative enzyme DNA sequence : TTGACTTACCGGAGAAGACTTTCAATGATTTTTGCATTGGATACGTATCTCGTTTTACTTTCCGTTGTTATAGGATATCA ATTTTTTGAGGATTCTTATCACTTTTATGACTCCGGAGCGTTGCTGCTGACTGCCGTAAGCATGCTGATCAGCCATCATG TATGCGCTTTTATGTTTCACCAGTATAAGCAGGTATGGACGTATACGGGAATAGGCGAGCTGCTTGATCTGCTGAAGGGG ATCACGCTGTCCGCAGCTGTGACAGCCGCCGTCCAATACGGGGTGTTCCACACGATTTTATTCCGGCTGTTAGCCGTCAG CTGGATGATTCAGCTATTGTTCATCGGAGGAAGCCGGATGATTTCGCGCGTACTGAAAGAAACGATCGGCAGGAAGCAAA ATGACTCTTCCCGGGCGCTGATCATCGGCGCGGGCGCAGGAGGAACGCTGCTCGTCCGTCAGCTTACCCAGAAAAACGAT CTCGGAATCATGCCTGTGGCTTTTATTGATGATGATCAGACGAAGCATAAGCTCAAAATTATGGGCCTGCCCGTCATCGG CGGAAAAGAAAGCATTATGCCGGCGGTGCAGAGGCTGAGAATTCACCACATTATCATCGCCATTCCGTCTCTTTGCACCC ATGAGCTCCAGACGTTATACAAAGAATGTGTGCAGACGGGCGCCCATATTAAAATCATGCCGCAATTTGATGAGATCCTG CTCGGAACGCAGGCTGCCGGACACATCAGGGATGTGAAAGCCGAAGATCTCCTCGGCAGAAAGCCGGTCACCCTTGATAC GAGCAAAATTTCTGACAGCATCAAAGGGAAAACGATTCTGGTCACGGGCGCCGGCGGCTCTATCGGTTCTGAAATCTGCC GCCAGATCAGCTCGTTTCTTCCGCATGAAATCGTCCTTCTCGGCCACGGGGAGAACAGCATTTATTCGGTGCATAACGAA CTGTCCGCACGCTTCGGCAAAGAGGTGCTTTTTCACGCGGAGATCGCCGATATTCAGGACAGAGATAAAATCTTTACCTT GATGAAAAAATACGAGCCGCACGTCGTCTATCATGCGGCCGCCCATAAACATGTGCCGTTAATGGAACATAATCCGGAAG AAGCCGTCAAAAACAATATTATCGGCACGAAAAATGTCGCCGAAGCCGCCGATATGTGCGGAACGGAAACATTCGTGCTG ATTTCTTCTGACAAAGCGGTCAATCCGGCCAATGTCATGGGCGCGACGAAGCGGTTTGCGGAAATGGTCATCATGAACCT CGGAAAGGTCAGCAACACCAAATTCGCCGCCGTCCGTTTCGGGAATGTGCTCGGAAGCCGCGGCAGCGTCATTCCGATTT TCAAAAAGCAGATTGAAAAAGGCGGACCCGTCACCGTCACGCATCCGGCGATGACAAGATATTTTATGACGATCCCCGAA GCGTCAAGACTCGTCATTCAGGCGGGGGCGCTTGCAAAAGGGCGGCAGATTTTCGTTCTGGATATGGGAGAACCCGTCAA AATCGTCGACTTGGCAAAAAACCTGATTCATTTATCAGGCTATACGACAGAACAGATTCCCATTGAATTCTCCGGCATCC GCCCGGGAGAAAAGATGTATGAAGAACTGCTGAATCATAATGAAGTACATACGGAGCAGATTTTTCCGAAAATCCATATC GGGAAAGCGGTGGACGGGGATTGGGCCGTGCTCATCCGTTTTATGGAGGAATTCAGCCGTCTGCCTGAAGATGAGCTGAG AAAACGGCTGTTTGAGGCGATCGAATCAGTACATGAAGAAGCGGCCGCAGGTGTGTGA Protein sequence : MTYRRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTYTGIGELLDLLKG ITLSAAVTAAVQYGVFHTILFRLLAVSWMIQLLFIGGSRMISRVLKETIGRKQNDSSRALIIGAGAGGTLLVRQLTQKND LGIMPVAFIDDDQTKHKLKIMGLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEIL LGTQAAGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFLPHEIVLLGHGENSIYSVHNE LSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVL ISSDKAVNPANVMGATKRFAEMVIMNLGKVSNTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPE ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELLNHNEVHTEQIFPKIHI GKAVDGDWAVLIRFMEEFSRLPEDELRKRLFEAIESVHEEAAAGV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-119 | 54 |
SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-117 | 51 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
epsC | YP_007498751.1 | Probable polysaccharide biosynthesis protein epsC | VFG1300 | Protein | 2e-122 | 52 |