Gene Information

Name : epsC (BAM5036_3080)
Accession : YP_007498751.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Virulence
Product : Probable polysaccharide biosynthesis protein epsC
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.2
Position : 3264159 - 3265976 bp
Length : 1818 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 15661000, 17704766; Product type pe : putative enzyme

DNA sequence :
TTGACTTACCGGAGAAGACTTTCAATGATTTTTGCATTGGATACGTATCTCGTTTTACTTTCCGTTGTTATAGGATATCA
ATTTTTTGAGGATTCTTATCACTTTTATGACTCCGGAGCGTTGCTGCTGACTGCCGTAAGCATGCTGATCAGCCATCATG
TATGCGCTTTTATGTTTCACCAGTATAAGCAGGTATGGACGTATACGGGAATAGGCGAGCTGCTTGATCTGCTGAAGGGG
ATCACGCTGTCCGCAGCTGTGACAGCCGCCGTCCAATACGGGGTGTTCCACACGATTTTATTCCGGCTGTTAGCCGTCAG
CTGGATGATTCAGCTATTGTTCATCGGAGGAAGCCGGATGATTTCGCGCGTACTGAAAGAAACGATCGGCAGGAAGCAAA
ATGACTCTTCCCGGGCGCTGATCATCGGCGCGGGCGCAGGAGGAACGCTGCTCGTCCGTCAGCTTACCCAGAAAAACGAT
CTCGGAATCATGCCTGTGGCTTTTATTGATGATGATCAGACGAAGCATAAGCTCAAAATTATGGGCCTGCCCGTCATCGG
CGGAAAAGAAAGCATTATGCCGGCGGTGCAGAGGCTGAGAATTCACCACATTATCATCGCCATTCCGTCTCTTTGCACCC
ATGAGCTCCAGACGTTATACAAAGAATGTGTGCAGACGGGCGCCCATATTAAAATCATGCCGCAATTTGATGAGATCCTG
CTCGGAACGCAGGCTGCCGGACACATCAGGGATGTGAAAGCCGAAGATCTCCTCGGCAGAAAGCCGGTCACCCTTGATAC
GAGCAAAATTTCTGACAGCATCAAAGGGAAAACGATTCTGGTCACGGGCGCCGGCGGCTCTATCGGTTCTGAAATCTGCC
GCCAGATCAGCTCGTTTCTTCCGCATGAAATCGTCCTTCTCGGCCACGGGGAGAACAGCATTTATTCGGTGCATAACGAA
CTGTCCGCACGCTTCGGCAAAGAGGTGCTTTTTCACGCGGAGATCGCCGATATTCAGGACAGAGATAAAATCTTTACCTT
GATGAAAAAATACGAGCCGCACGTCGTCTATCATGCGGCCGCCCATAAACATGTGCCGTTAATGGAACATAATCCGGAAG
AAGCCGTCAAAAACAATATTATCGGCACGAAAAATGTCGCCGAAGCCGCCGATATGTGCGGAACGGAAACATTCGTGCTG
ATTTCTTCTGACAAAGCGGTCAATCCGGCCAATGTCATGGGCGCGACGAAGCGGTTTGCGGAAATGGTCATCATGAACCT
CGGAAAGGTCAGCAACACCAAATTCGCCGCCGTCCGTTTCGGGAATGTGCTCGGAAGCCGCGGCAGCGTCATTCCGATTT
TCAAAAAGCAGATTGAAAAAGGCGGACCCGTCACCGTCACGCATCCGGCGATGACAAGATATTTTATGACGATCCCCGAA
GCGTCAAGACTCGTCATTCAGGCGGGGGCGCTTGCAAAAGGGCGGCAGATTTTCGTTCTGGATATGGGAGAACCCGTCAA
AATCGTCGACTTGGCAAAAAACCTGATTCATTTATCAGGCTATACGACAGAACAGATTCCCATTGAATTCTCCGGCATCC
GCCCGGGAGAAAAGATGTATGAAGAACTGCTGAATCATAATGAAGTACATACGGAGCAGATTTTTCCGAAAATCCATATC
GGGAAAGCGGTGGACGGGGATTGGGCCGTGCTCATCCGTTTTATGGAGGAATTCAGCCGTCTGCCTGAAGATGAGCTGAG
AAAACGGCTGTTTGAGGCGATCGAATCAGTACATGAAGAAGCGGCCGCAGGTGTGTGA

Protein sequence :
MTYRRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTYTGIGELLDLLKG
ITLSAAVTAAVQYGVFHTILFRLLAVSWMIQLLFIGGSRMISRVLKETIGRKQNDSSRALIIGAGAGGTLLVRQLTQKND
LGIMPVAFIDDDQTKHKLKIMGLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEIL
LGTQAAGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFLPHEIVLLGHGENSIYSVHNE
LSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVL
ISSDKAVNPANVMGATKRFAEMVIMNLGKVSNTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPE
ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELLNHNEVHTEQIFPKIHI
GKAVDGDWAVLIRFMEEFSRLPEDELRKRLFEAIESVHEEAAAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-119 54
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-117 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsC YP_007498751.1 Probable polysaccharide biosynthesis protein epsC VFG1300 Protein 2e-122 52