|
Name : smpB (BAM5036_3002) Accession : YP_007498674.1 Strain : Bacillus amyloliquefaciens UCMB5036 Genome accession: NC_020410 Putative virulence/resistance : Unknown Product : tmRNA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 3184052 - 3184522 bp Length : 471 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10947848, 11395451, 11918677, 12682299; Product type f : factor DNA sequence : ATGCCAAAAGGATCAGGCAAAGTATTATCACAAAACAAAAAAGCAAACCATGATTACTTTATAGAAGAAACCTATGAAAC AGGCATCGTGCTGCAGGGGACGGAGATTAAGTCCATTCGCGCCGGCCGCGTAAACATGAAGGATTCCTTTGCGAAAATCG AGCGCGGCGAAGTGTTCCTCCACAACATGCACATCAGCCCGTACGAGCAGGGAAACCGCTATAACCACGACCCGCTCCGG ACGAGAAAGCTTTTGATGCACCGGAAAGAAATCAATAAGCTGATCGGTCTGACGAAAGAGAAAGGCTATTCCCTCGTGCC GCTGAAGCTGTATTTGAAAAACGGCTTCGCCAAAGTGTTAATCGGCCTCGGAAAAGGGAAGAAAACATACGATAAACGCG AAGATTTAAAACGAAAAGACGCCAAAAGGGAAATCGAAAGAGCGTTCAGAGACAGACAAAAAGGCTTCTGA Protein sequence : MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNMKDSFAKIERGEVFLHNMHISPYEQGNRYNHDPLR TRKLLMHRKEINKLIGLTKEKGYSLVPLKLYLKNGFAKVLIGLGKGKKTYDKREDLKRKDAKREIERAFRDRQKGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 7e-44 | 63 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-33 | 47 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-27 | 42 |
